2024
Establishing the longitudinal hemodynamic mapping framework for wearable-driven coronary digital twins.
npj Digit. Medicine, 2024
Designing a GPU-Accelerated Communication Layer for Efficient Fluid-Structure Interaction Computations on Heterogeneous Systems.
Proceedings of the International Conference for High Performance Computing, 2024
HarVI: Real-Time Intervention Planning for Coronary Artery Disease Using Machine Learning.
Proceedings of the Computational Science - ICCS 2024, 2024
Velocity Temporal Shape Affects Simulated Flow in Left Coronary Arteries.
Proceedings of the Computational Science - ICCS 2024, 2024
Investigating the impact of sickle cell disease on red blood cell transport in complex capillary networks.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
Leveraging Computational Fluid Dynamics for Next-Generation Preoperative Planning in Vascular Surgery.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
Hemodynamics comparison of an hour-long rest and activity state data in a human coronary digital twin.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
Identifying When Steady-State Flow Simulations In Patient-Specific Coronaries Recapitulate Pulsatile Flow Dynamics.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
Systematic characterization and automated alignment of coronary tree geometries.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
Optimizing Temporal Waveform Analysis: A Novel Pipeline for Efficient Characterization of Left Coronary Artery Velocity Profiles.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
2023
Effect of constitutive law on the erythrocyte membrane response to large strains.
Comput. Math. Appl., February, 2023
Establishing massively parallel models to examine the influence of cell heterogeneity on tumor growth.
J. Comput. Sci., 2023
Establishing metrics to quantify spatial similarity in spherical and red blood cell distributions.
J. Comput. Sci., 2023
Moment Representation of Regularized Lattice Boltzmann Methods on NVIDIA and AMD GPUs.
Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, 2023
Cloud Computing to Enable Wearable-Driven Longitudinal Hemodynamic Maps.
Proceedings of the International Conference for High Performance Computing, 2023
Enhancing Adaptive Physics Refinement Simulations Through the Addition of Realistic Red Blood Cell Counts.
Proceedings of the International Conference for High Performance Computing, 2023
Performance Evaluation of Heterogeneous GPU Programming Frameworks for Hemodynamic Simulations.
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Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, 2023
Low-Cost Post Hoc Reconstruction of HPC Simulations at Full Resolution.
Proceedings of the 13th IEEE Symposium on Large Data Analysis and Visualization, 2023
Optimizing Cloud Computing Resource Usage for Hemodynamic Simulation.
Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2023
2022
Propagation Pattern for Moment Representation of the Lattice Boltzmann Method.
IEEE Trans. Parallel Distributed Syst., 2022
Evaluation of U-Net Based Architectures for Automatic Aortic Dissection Segmentation.
ACM Trans. Comput. Heal., 2022
Evaluating Cardiovascular Surgical Planning in Mobile Augmented Reality.
CoRR, 2022
The role of extended reality for planning coronary artery bypass graft surgery.
Proceedings of the 2022 IEEE Visualization and Visual Analytics (VIS), 2022
Distributed Acceleration of Adhesive Dynamics Simulations.
Proceedings of the EuroMPI/USA'22: 29th European MPI Users' Group Meeting, Chattanooga, TN, USA, September 26, 2022
Developing a Scalable Cellular Automaton Model of 3D Tumor Growth.
Proceedings of the Computational Science - ICCS 2022, 2022
Establishing Metrics to Quantify Underlying Structure in Vascular Red Blood Cell Distributions.
Proceedings of the Computational Science - ICCS 2022, 2022
Patient- and Ventilator-Specific Modeling to Drive the Use and Development of 3D Printed Devices for Rapid Ventilator Splitting During the COVID-19 Pandemic.
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Proceedings of the Computational Science - ICCS 2022, 2022
High Performance Adaptive Physics Refinement to Enable Large-Scale Tracking of Cancer Cell Trajectory.
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Proceedings of the IEEE International Conference on Cluster Computing, 2022
2021
Analysis of GPU Data Access Patterns on Complex Geometries for the D3Q19 Lattice Boltzmann Algorithm.
IEEE Trans. Parallel Distributed Syst., 2021
DOE Computational Science Graduate Fellowship Research Showcase.
Comput. Sci. Eng., 2021
Multiscale modeling of blood flow to assess neurological complications in patients supported by venoarterial extracorporeal membrane oxygenation.
Comput. Biol. Medicine, 2021
Global Sensitivity Analysis For Clinically Validated 1D Models of Fractional Flow Reserve.
Proceedings of the 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2021
An Interpretable Machine Learning Model to Classify Coronary Bifurcation Lesions.
Proceedings of the 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2021
Predicting aneurysmal degeneration of type B aortic dissection with computational fluid dynamics.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021
2020
Harvis: an interactive virtual reality tool for hemodynamic modification and simulation.
J. Comput. Sci., 2020
Multi-GPU immersed boundary method hemodynamics simulations.
J. Comput. Sci., 2020
Cloud Computing for COVID-19: Lessons Learned From Massively Parallel Models of Ventilator Splitting.
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Comput. Sci. Eng., 2020
Evaluating the Influence of Hemorheological Parameters on Circulating Tumor Cell Trajectory and Simulation Time.
Proceedings of the PASC '20: Platform for Advanced Scientific Computing Conference, Geneva, Switzerland, June 29, 2020
Computational Framework to Evaluate the Hydrodynamics of Cell Scaffold Geometries.
Proceedings of the 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2020
2019
Performance portability study for massively parallel computational fluid dynamics application on scalable heterogeneous architectures.
J. Parallel Distributed Comput., 2019
A framework for comparing vascular hemodynamics at different points in time.
Comput. Phys. Commun., 2019
Moment representation in the lattice Boltzmann method on massively parallel hardware.
Proceedings of the International Conference for High Performance Computing, 2019
Investigating the Role of VR in a Simulation-Based Medical Planning System for Coronary Interventions.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019
Low-Overhead In Situ Visualization Using Halo Replay.
Proceedings of the 9th IEEE Symposium on Large Data Analysis and Visualization, 2019
Immersed Boundary Method Halo Exchange in a Hemodynamics Application.
Proceedings of the Computational Science - ICCS 2019, 2019
Multi-physics simulations of particle tracking in arterial geometries with a scalable moving window algorithm.
Proceedings of the 2019 IEEE International Conference on Cluster Computing, 2019
2018
GPU Data Access on Complex Geometries for D3Q19 Lattice Boltzmann Method.
Proceedings of the 2018 IEEE International Parallel and Distributed Processing Symposium, 2018
Computational Fluid Modeling to Understand the Role of Anatomy in Bifurcation Lesion Disease.
Proceedings of the 25th IEEE International Conference on High Performance Computing Workshops, 2018
2017
A Computational Framework to Assess the Influence of Changes in Vascular Geometry on Blood Flow.
Proceedings of the Platform for Advanced Scientific Computing Conference, 2017
Numerical simulation of a compound capsule in a constricted microchannel.
Proceedings of the International Conference on Computational Science, 2017
2016
Does the degree of coarctation of the aorta influence wall shear stress focal heterogeneity?
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016
2015
Scaling Support Vector Machines on modern HPC platforms.
J. Parallel Distributed Comput., 2015
Massively parallel simulations of hemodynamics in the primary large arteries of the human vasculature.
J. Comput. Sci., 2015
Reusing industrial robots to achieve sustainability in small and medium-sized enterprises (SMEs).
Ind. Robot, 2015
Massively parallel models of the human circulatory system.
Proceedings of the International Conference for High Performance Computing, 2015
2014
Parallel in time approximation of the lattice Boltzmann method for laminar flows.
J. Comput. Phys., 2014
Locality-Optimized Mixed Static/Dynamic Scheduling for Improving Load Balancing on SMPs.
Proceedings of the 21st European MPI Users' Group Meeting, 2014
MIC-SVM: Designing a Highly Efficient Support Vector Machine for Advanced Modern Multi-core and Many-Core Architectures.
Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014
A Spatio-temporal Coupling Method to Reduce the Time-to-Solution of Cardiovascular Simulations.
Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014
Analysis of Pressure Gradient Across Aortic Stenosis with Massively Parallel Computational Simulation.
Proceedings of the Computing in Cardiology, CinC 2014, 2014
2013
Multiphysics simulations: Challenges and opportunities.
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Int. J. High Perform. Comput. Appl., 2013
Massively Parallel Model of Extended Memory Use in Evolutionary Game Dynamics.
Proceedings of the 27th IEEE International Symposium on Parallel and Distributed Processing, 2013
Performance Analysis of the Lattice Boltzmann Model Beyond Navier-Stokes.
Proceedings of the 27th IEEE International Symposium on Parallel and Distributed Processing, 2013
2012
Massively Parallel Model of Evolutionary Game Dynamics.
Proceedings of the 2012 SC Companion: High Performance Computing, 2012
A Lattice Boltzmann Simulation of Hemodynamics in a Patient-Specific Aortic Coarctation Model.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges, 2012
2011
Evaluation of Artery Visualizations for Heart Disease Diagnosis.
IEEE Trans. Vis. Comput. Graph., 2011
Drug discovery using very large numbers of patents. General strategy with extensive use of match and edit operations.
J. Comput. Aided Mol. Des., 2011
Efficient methods for broadcasting multi-slot messages with random access with capture.
Proceedings of the MILCOM 2011, 2011
2010
Multiscale Simulation of Cardiovascular flows on the IBM Bluegene/P: Full Heart-Circulation System at Red-Blood Cell Resolution.
Proceedings of the Conference on High Performance Computing Networking, 2010
2008
An Efficient Parallel Implementation of the Hidden Markov Methods for Genomic Sequence-Search on a Massively Parallel System.
IEEE Trans. Parallel Distributed Syst., 2008
EUDOC on the IBM Blue Gene/L system: Accelerating the transfer of drug discoveries from laboratory to patient.
IBM J. Res. Dev., 2008
Asynchronous task dispatch for high throughput computing for the eServer IBM Blue Gene® Supercomputer.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008
2007
Parallel genomic sequence-search on a massively parallel system.
Proceedings of the 4th Conference on Computing Frontiers, 2007
2006
Poster reception - Optimizing EUDOC for the IBM eServer Blue Gene supercomputer.
Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, 2006