Attila Gürsoy
Orcid: 0000-0002-2297-2113Affiliations:
- Koç University, Istanbul, Turkey
According to our database1,
Attila Gürsoy
authored at least 55 papers
between 1991 and 2024.
Collaborative distances:
Collaborative distances:
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on orcid.org
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Bibliography
2024
ProInterVal: Validation of Protein-Protein Interfaces through Learned Interface Representations.
J. Chem. Inf. Model., 2024
J. Chem. Inf. Model., 2024
2023
The interaction between mutated DYRK1A and APP suggests a potential target for vascular cognitive impairment.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
HMI-PRED 2.0: a biologist-oriented web application for prediction of host-microbe protein-protein interaction by interface mimicry.
Bioinform., October, 2022
SARS-CoV-2 Interactome 3D: A Web interface for 3D visualization and analysis of SARS-CoV-2-human mimicry and interactions.
Bioinform., 2022
2021
2020
Embedding Alternative Conformations of Proteins in Protein-Protein Interaction Networks.
Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020
Identification of potential inhibitors of human methionine aminopeptidase (type II) for cancer therapy: Structure-based virtual screening, ADMET prediction and molecular dynamics studies.
Comput. Biol. Chem., 2020
Proceedings of the 28th Signal Processing and Communications Applications Conference, 2020
2019
3D spatial organization and network-guided comparison of mutation profiles in Glioblastoma reveals similarities across patients.
PLoS Comput. Biol., 2019
2018
Analysis of single amino acid variations in singlet hot spots of protein-protein interfaces.
Bioinform., 2018
2017
Topological, functional, and structural analyses of protein-protein interaction networks of breast cancer lung and brain metastases.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2017
2014
The Structural Pathway of Interleukin 1 (IL-1) Initiated Signaling Reveals Mechanisms of Oncogenic Mutations and SNPs in Inflammation and Cancer.
PLoS Comput. Biol., 2014
PRISM: a web server and repository for prediction of protein-protein interactions and modeling their 3D complexes.
Nucleic Acids Res., 2014
Proceedings of the Information Sciences and Systems 2014, 2014
2012
A Strategy Based on Protein-Protein Interface Motifs May Help in Identifying Drug Off-Targets.
J. Chem. Inf. Model., 2012
2010
Nucleic Acids Res., 2010
2009
PLoS Comput. Biol., 2009
Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy.
Bioinform., 2009
A survey of available tools and web servers for analysis of protein-protein interactions and interfaces.
Briefings Bioinform., 2009
2008
Nucleic Acids Res., 2008
Proceedings of the Protein-protein Interactions and Networks: Identification, 2008
2007
Int. J. High Perform. Comput. Appl., 2007
2006
Extracting Gene Regulation Information from Microarray Time-Series Data Using Hidden Markov Models.
Proceedings of the Computer and Information Sciences, 2006
2005
J. Supercomput., 2005
Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfaces.
Bioinform., 2005
Proceedings of the Parallel Processing and Applied Mathematics, 2005
2004
J. Parallel Distributed Comput., 2004
Folding Dynamics of Proteins from Denatured to Native State: Principal Component Analysis.
J. Comput. Biol., 2004
Bioinform., 2004
2003
Proceedings of the Parallel Processing and Applied Mathematics, 2003
Proceedings of the Computer and Information Sciences, 2003
2002
PATIKA: an integrated visual environment for collaborative construction and analysis of cellular pathways.
Bioinform., 2002
2001
Proceedings of the Euro-Par 2001: Parallel Processing, 2001
2000
Proceedings of the Euro-Par 2000, Parallel Processing, 6th International Euro-Par Conference, Munich, Germany, August 29, 2000
1999
Parallel Hierarchical Radiosity.
Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 1999
Mechanisms for Programming SMP Clusters.
Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 1999
Proceedings of the Computational Molecular Dynamics: Challenges, Methods, Ideas, 1999
1996
Int. J. High Perform. Comput. Appl., 1996
Proceedings of the 1996 International Conference on Parallel Processing, 1996
1995
Modularity, Reuse and Efficiency with Message-Driven Libraries.
Proceedings of the Seventh SIAM Conference on Parallel Processing for Scientific Computing, 1995
1994
Proceedings of the 8th International Symposium on Parallel Processing, 1994
1991
Proceedings of the Proceedings Supercomputing '91, 1991