Asim S. Siddiqui

According to our database, Asim S. Siddiqui authored at least 6 papers between 1998 and 2012.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2012

RNA-Seq Mapping and Detection of Gene Fusions with a Suffix Array Algorithm.

Onur Sakarya, Heinz Breu, Milan Radovich, Yongzhi Chen, Yulei N. Wang, Catalin C. Barbacioru, Sowmi Utiramerur, Penn P. Whitley, Joel P. Brockman, Paolo Vatta, Zheng Zhang, Liviu Popescu, Matthew W. Muller, Vidya Kudlingar, Nriti Garg, Chieh-Yuan Li, Benjamin S. Kong, John P. Bodeau, Robert C. Nutter, Jian Gu, Kelli S. Bramlett, Jeffrey K. Ichikawa, Fiona C. Hyland, Asim S. Siddiqui

PLoS Comput. Biol., 2012

2006

cisRED: a database system for genome-scale computational discovery of regulatory elements.

Gordon Robertson, Misha Bilenky, Keven Lin, An He, W. Yuen, M. Dagpinar, Richard Varhol, Kevin Teague, Obi L. Griffith, X. Zhang, Y. Pan, Maik Hassel, Monica C. Sleumer, W. Pan, Erin Pleasance, M. Chuang, H. Hao, Yvonne Y. Li, Neil Robertson, C. Fjell, Bernard Li, Stephen B. Montgomery, Tamara Astakhova, Jianjun Zhou, Jörg Sander, Asim S. Siddiqui, Steven J. M. Jones

Nucleic Acids Res., 2006

Sun Grid Engine Package for OSCAR - A Google Summer Of Code 2005 Project.

Babu Sundaram, Barbara M. Chapman, Bernard Li, Mark Mayo, Asim S. Siddiqui, Steven J. M. Jones

Proceedings of the 20th Annual International Symposium on High Performance Computing Systems and Applications (HPCS 2006), 2006

2005

cis-Regulatory Element Prediction in Mammalian Genomes.

Asim S. Siddiqui, Gordon Robertson, Misha Bilenky, Tamara Astakhova, Obi L. Griffith, Maik Hassel, Keven Lin, Stephen B. Montgomery, Mehrdad Oveisi, Erin Pleasance, Neil Robertson, Monica C. Sleumer, Kevin Teague, Richard Varhol, Maggie Zhang, Steven J. M. Jones

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

2001

3Dee: a database of protein structural domains.

Asim S. Siddiqui, Uwe Dengler, Geoffrey J. Barton

Bioinform., 2001

1998

JPred: a consensus secondary structure prediction server.

James A. Cuff, Michele E. Clamp, Asim S. Siddiqui, M. Finlay, Geoffrey J. Barton

Bioinform., 1998