Ashwini Patil

According to our database, Ashwini Patil authored at least 21 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins.

Alessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, Alex S. Holehouse, Daniel A. Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M. Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun-Sop Han, Myong-Chol Ma, Lukasz A. Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md. Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim F. Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdös, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., July, 2023

2022

AI-driven streamlined modeling: experiences and lessons learned from multiple domains.

Sagar Sunkle, Krati Saxena, Ashwini Patil, Vinay Kulkarni

Softw. Syst. Model., 2022

2021

Integrated "Generate, Make, and Test" for Formulated Products using Knowledge Graphs.

Sagar Sunkle, Deepak Jain, Krati Saxena, Ashwini Patil, Tushita Singh, Beena Rai, Vinay Kulkarni

Data Intell., 2021

2020

Mining Heterogeneous Data for Formulation Design.

Krati Saxena, Ashwini Patil, Sagar Sunkle, Vinay Kulkarni

Proceedings of the 20th International Conference on Data Mining Workshops, 2020

Checking, Generating, and Revising Safety Data Sheets using Globally Harmonized System Standards.

Ashwini Patil, Sagar Sunkle, Vinay Kulkarni

Proceedings of the 24th IEEE International Enterprise Distributed Object Computing Conference, 2020

Information Extraction and Graph Representation for the Design of Formulated Products.

Sagar Sunkle, Krati Saxena, Ashwini Patil, Vinay Kulkarni, Deepak Jain, Rinu Chacko, Beena Rai

Proceedings of the Advanced Information Systems Engineering, 2020

2019

Protein-Protein Interaction Databases.

Ashwini Patil

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions.

Ronesh Sharma, Alok Sharma, Ashwini Patil, Tatsuhiko Tsunoda

BMC Bioinform., 2019

Clustering of Small-Sample Single-Cell RNA-Seq Data via Feature Clustering and Selection.

Edwin Vans, Alok Sharma, Ashwini Patil, Daichi Shigemizu, Tatsuhiko Tsunoda

Proceedings of the PRICAI 2019: Trends in Artificial Intelligence, 2019

2018

TimeXNet Web: identifying cellular response networks from diverse omics time-course data.

Phit Ling Tan, Yosvany López, Kenta Nakai, Ashwini Patil

Bioinform., 2018

OPAL: prediction of MoRF regions in intrinsically disordered protein sequences.

Ronesh Sharma, Gaurav Raicar, Tatsuhiko Tsunoda, Ashwini Patil, Alok Sharma

Bioinform., 2018

2016

Predicting MoRFs in protein sequences using HMM profiles.

Ronesh Sharma, Shiu Kumar, Tatsuhiko Tsunoda, Ashwini Patil, Alok Sharma

BMC Bioinform., 2016

2015

HitPredict version 4: comprehensive reliability scoring of physical protein-protein interactions from more than 100 species.

Yosvany López, Kenta Nakai, Ashwini Patil

Database J. Biol. Databases Curation, 2015

2014

TimeXNet: Identifying active gene sub-networks using time-course gene expression profiles.

Ashwini Patil, Kenta Nakai

BMC Syst. Biol., 2014

2013

Linking Transcriptional Changes over Time in Stimulated Dendritic Cells to Identify Gene Networks Activated during the Innate Immune Response.

Ashwini Patil, Yutaro Kumagai, Kuo-ching Liang, Yutaka Suzuki, Kenta Nakai

PLoS Comput. Biol., 2013

Identification of novel motif patterns to decipher the promoter architecture of co-expressed genes in Arabidopsis thaliana.

Yosvany López, Ashwini Patil, Kenta Nakai

BMC Syst. Biol., 2013

2012

Functional Annotation of Intrinsically Disordered Domains by Their Amino Acid Content Using IDD Navigator.

Ashwini Patil, Shunsuke Teraguchi, Huy Dinh, Kenta Nakai, Daron M. Standley

Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

2011

HitPredict: a database of quality assessed protein-protein interactions in nine species.

Ashwini Patil, Kenta Nakai, Haruki Nakamura

Nucleic Acids Res., 2011

Fault Tolerance in Cluster Computing System.

Ashwini Patil, Ankit Shah, Sheetal Gaikwad, Akassh A. Mishra, Simranjit Singh Kohli, Sudhir Dhage

Proceedings of the 2011 International Conference on P2P, 2011

2010

Intrinsically disordered domains deviate significantly from random sequences in mammalian proteins.

Shunsuke Teraguchi, Ashwini Patil, Daron M. Standley

BMC Bioinform., 2010

2005

Filtering high-throughput protein-protein interaction data using a combination of genomic features.

Ashwini Patil, Haruki Nakamura

BMC Bioinform., 2005