Ashkan Golshani

According to our database, Ashkan Golshani authored at least 14 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Large-scale data mining pipeline for identifying novel soybean genes involved in resistance against the soybean cyst nematode.

Nour Nissan, Julia Hooker, Eric Arezza, Kevin Dick, Ashkan Golshani, Benjamin Mimee, Elroy Cober, James R. Green, Bahram Samanfar

Frontiers Bioinform., May, 2023

2019

Insights into the suitability of utilizing brown rats (<i>Rattus norvegicus</i>) as a model for healing spinal cord injury with epidermal growth factor and fibroblast growth factor-II by predicting protein-protein interactions.

Nashira Grigg, Andrew Schoenrock, Kevin Dick, James R. Green, Ashkan Golshani, Alex Wong, Frank Dehne, Eve C. Tsai, Kyle K. Biggar

Comput. Biol. Medicine, 2019

2017

A Type-2 fuzzy data fusion approach for building reliable weighted protein interaction networks with application in protein complex detection.

Adele Mehranfar, Nasser Ghadiri, Morteza Kouhsar, Ashkan Golshani

Comput. Biol. Medicine, 2017

Designing anti-Zika virus peptides derived from predicted human-Zika virus protein-protein interactions.

Tom Kazmirchuk, Kevin Dick, Daniel J. Burnside, Brad Barnes, Houman Moteshareie, Maryam Hajikarimlou, Katayoun Omidi, Duale Ahmed, Andrew Low, Clara Lettl, Mohsen Hooshyar, Andrew Schoenrock, Sylvain Pitre, Mohan Babu, Edana Cassol, Bahram Samanfar, Alex Wong, Frank Dehne, James R. Green, Ashkan Golshani

Comput. Biol. Chem., 2017

Positome: A method for improving protein-protein interaction quality and prediction accuracy.

Kevin Dick, Frank Dehne, Ashkan Golshani, James R. Green

Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2017

2015

Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in <i>Escherichia coli</i>.

James Vlasblom, Khalid Zuberi, Harold Rodriguez, Roland Arnold, Alla Gagarinova, Viktor Deineko, Ashwani Kumar, Elisa Leung, Kamran Rizzolo, Bahram Samanfar, Luke Chang, Sadhna Phanse, Ashkan Golshani, Jack Greenblatt, Walid A. Houry, Andrew Emili, Quaid Morris, Gary D. Bader, Mohan Babu

Bioinform., 2015

Engineering inhibitory proteins with InSiPS: the in-silico protein synthesizer.

Andrew Schoenrock, Daniel J. Burnside, Houman Moteshareie, Alex Wong, Ashkan Golshani, Frank Dehne

Proceedings of the International Conference for High Performance Computing, 2015

2014

Efficient prediction of human protein-protein interactions at a global scale.

Andrew Schoenrock, Bahram Samanfar, Sylvain Pitre, Mohsen Hooshyar, Ke Jin, Charles A. Phillips, Hui Wang, Sadhna Phanse, Katayoun Omidi, Yuan Gui, Md Alamgir, Alex Wong, Fredrik Barrenäs, Mohan Babu, Mikael Benson, Michael A. Langston, James R. Green, Frank K. H. A. Dehne, Ashkan Golshani

BMC Bioinform., 2014

2011

Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences.

Adam Amos-Binks, Catalin Patulea, Sylvain Pitre, Andrew Schoenrock, Yuan Gui, James R. Green, Ashkan Golshani, Frank K. H. A. Dehne

BMC Bioinform., 2011

MP-PIPE: a massively parallel protein-protein interaction prediction engine.

Andrew Schoenrock, Frank K. H. A. Dehne, James R. Green, Ashkan Golshani, Sylvain Pitre

Proceedings of the 25th International Conference on Supercomputing, 2011, Tucson, AZ, USA, May 31, 2011

2007

Colony size measurement of the yeast gene deletion strains for functional genomics.

Negar Memarian, Matthew Jessulat, Javad Alirezaie, Nadereh Mir-Rashed, Jianhua Xu, Mehri Zareie, Myron Smith, Ashkan Golshani

BMC Bioinform., 2007

2006

PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.

Sylvain Pitre, Frank K. H. A. Dehne, Albert Chan, James Cheetham, Alex Duong, Andrew Emili, Marinella Gebbia, Jack Greenblatt, Matthew Jessulat, Nevan J. Krogan, Xuemei Luo, Ashkan Golshani

BMC Bioinform., 2006

Automated System for Image Analysis of Yeast Colonies: A Novel Application in Functional Genomics.

Negar Memarian, Javad Alirezaie, Ashkan Golshani

Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

Data Mining Methods for Protein-Protein Interactions.

Zahra Nafar, Ashkan Golshani

Proceedings of the Canadian Conference on Electrical and Computer Engineering, 2006