Arun K. Ramani

According to our database, Arun K. Ramani authored at least 7 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

RNAget: an API to securely retrieve RNA quantifications.

Sean Upchurch, Emilio Palumbo, Jeremy Adams, David Bujold, Guillaume Bourque, Jared Nedzel, Keenan Graham, Meenakshi S. Kagda, Pedro Assis, Benjamin C. Hitz, Emilio Righi, Roderic Guigó, Barbara J. Wold, Alvis Brazma, Julia Burchard, Joe Capka, Michael Cherry, Laura Clarke, Brian Craft, Manolis Dermitzakis, Mark Diekhans, John Dursi, Michael Sean Fitzsimons, Zac Flaming, Romina Garrido, Alfred Gil, Paul Godden, Matt Green, Mitch Guttman, Brian Haas, Max Haeussler, Bo Li, Sten Linnarsson, Adam Lipski, David Liu, Simonne Longerich, David Lougheed, Jonathan Manning, John C. Marioni, Christopher Meyer, Stephen B. Montgomery, Alyssa Morrow, Alfonso Muñoz-Pomer Fuentes, Jared L. Nedzel, David Nguyen, Kevin Osborn, Francis Ouellette, Irene Papatheodorou, Dmitri D. Pervouchine, Arun K. Ramani, Jordi Rambla, Bashir Sadjad, David Steinberg, Jeremiah Talkar, Timothy Tickle, Kathy Tzeng, Saman Vaisipour, Sean Watford, Barbara Wold, Zhenyu Zhang, Jing Zhu

Bioinform., April, 2023

Evaluation of single-cell RNAseq labelling algorithms using cancer datasets.

Erik Christensen, Ping Luo, Andrei L. Turinsky, Mia Husic, Alaina Mahalanabis, Alaine Naidas, Juan Javier Díaz-Mejía, Michael Brudno, Trevor J. Pugh, Arun K. Ramani, Parisa Shooshtari

Briefings Bioinform., January, 2023

2021

MetaFusion: a high-confidence metacaller for filtering and prioritizing RNA-seq gene fusion candidates.

Michael Apostolides, Yue Jiang, Mia Husic, Robert Siddaway, Cynthia Hawkins, Andrei L. Turinsky, Michael Brudno, Arun K. Ramani

Bioinform., 2021

2020

CReSCENT: CanceR Single Cell ExpressioN Toolkit.

Suluxan Mohanraj, Juan Javier Díaz-Mejía, Martin D. Pham, Hillary Elrick, Mia Husic, Shaikh Rashid, Ping Luo, Prabnur Bal, Kevin Lu, Samarth Patel, Alaina Mahalanabis, Alaine Naidas, Erik Christensen, Danielle Croucher, Laura M. Richards, Parisa Shooshtari, Michael Brudno, Arun K. Ramani, Trevor J. Pugh

Nucleic Acids Res., 2020

2006

Integrating Co-occurrence Statistics with Information Extraction for Robust Retrieval of Protein Interactions from Medline.

Razvan C. Bunescu, Raymond J. Mooney, Arun K. Ramani, Edward M. Marcotte

Proceedings of the Workshop on Linking Natural Language and Biology, 2006

2005

Comparative experiments on learning information extractors for proteins and their interactions.

Razvan C. Bunescu, Ruifang Ge, Rohit J. Kate, Edward M. Marcotte, Raymond J. Mooney, Arun K. Ramani, Yuk Wah Wong

Artif. Intell. Medicine, 2005

Using Biomedical Literature Mining to Consolidate the Set of Known Human Protein-Protein Interactions.

Arun K. Ramani, Razvan C. Bunescu, Raymond J. Mooney, Edward M. Marcotte

Proceedings of the ACL-ISMB Workshop on Linking Biological Literature, 2005