Arrate Muñoz-Barrutia

Orcid: 0000-0002-1573-1661

According to our database1, Arrate Muñoz-Barrutia authored at least 67 papers between 1999 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Alzheimer's disease detection in PSG signals.
CoRR, 2024

Calibration Methods for Alzheimer Disease Detection.
Proceedings of the 34th IEEE International Workshop on Machine Learning for Signal Processing, 2024

2023
From Nano to Macro: An overview of the IEEE Bio Image and Signal Processing Technical Committee.
IEEE Signal Process. Mag., June, 2023

ABANICCO: A New Color Space for Multi-Label Pixel Classification and Color Analysis.
Sensors, March, 2023

BioImage.IO Chatbot: A Personalized Assistant for BioImage Analysis Augmented by Community Knowledge Base.
CoRR, 2023

BiaPy: a ready-to-use library for Bioimage Analysis Pipelines.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

2022
Stable Deep Neural Network Architectures for Mitochondria Segmentation on Electron Microscopy Volumes.
Neuroinformatics, 2022

ABANICCO: A New Color Space for Multi-Label Pixel Classification and Color Segmentation.
CoRR, 2022

Translational Lung Imaging Analysis Through Disentangled Representations.
CoRR, 2022

Deep learning based domain adaptation for mitochondria segmentation on EM volumes.
Comput. Methods Programs Biomed., 2022

2021
Search for temporal cell segmentation robustness in phase-contrast microscopy videos.
CoRR, 2021

Molecular Imaging of Pulmonary Tuberculosis in an Ex-Vivo Mouse Model Using Spectral Photon-Counting Computed Tomography and Micro-CT.
IEEE Access, 2021

Delta-Radiomics Signature For Prediction Of Survival In Advanced Nsclc Patients Treated With Immunotherapy.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

2020
Guest Editorial: Special Issue on Imaging-Based Diagnosis of COVID-19.
IEEE Trans. Medical Imaging, 2020

ANHIR: Automatic Non-Rigid Histological Image Registration Challenge.
IEEE Trans. Medical Imaging, 2020

Development of an Inverted Epifluorescence Microscope for Long-Term Monitoring of Bacteria in Multiplexed Microfluidic Devices.
Sensors, 2020

Editorial: Introduction to the Issue on Domain Enriched Learning for Medical Imaging.
IEEE J. Sel. Top. Signal Process., 2020

MosaicExplorerJ: Interactive stitching of terabyte-size tiled datasets from lightsheet microscopy.
F1000Research, 2020

Nonlinear Image Registration and Pixel Classification Pipeline for the Study of Tumor Heterogeneity Maps.
Entropy, 2020

2019
Dynamic Atlas-Based Segmentation and Quantification of Neuromelanin-Rich Brainstem Structures in Parkinson Disease.
IEEE Trans. Medical Imaging, 2019

Tuberculosis Lesions in CT Images Inferred using 3D-CNN and Multi-Task Learning.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

2018
Spotlight on Bioimaging and Signal Processing [In the Spotlight].
IEEE Signal Process. Mag., 2018

Tuberculosis Histopathology on X Ray CT.
Proceedings of the Image Analysis for Moving Organ, Breast, and Thoracic Images, 2018

Towards an informational model for tuberculosis lesion discrimination on X-ray CT images.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

Benchmarking of Image Registration Methods for Differently Stained Histological Slides.
Proceedings of the 2018 IEEE International Conference on Image Processing, 2018

2017
Full L<sub>1</sub>-regularized Traction Force Microscopy over whole cells.
BMC Bioinform., 2017

Super-resolved Traction Force Microscopy over whole cells.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

Automated analysis of collagen networks via microscopy.
Proceedings of the 25th European Signal Processing Conference, 2017

2016
L1-regularized reconstruction for traction force microscopy.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

2015
Toward a Morphodynamic Model of the Cell: Signal processing for cell modeling.
IEEE Signal Process. Mag., 2015

Quantitative Bioimaging: Signal Processing in Light Microscopy [From the Guest Editors].
IEEE Signal Process. Mag., 2015

Quantification of pulmonary vessel diameter in low-dose CT images.
Proceedings of the Medical Imaging 2015: Computer-Aided Diagnosis, 2015

Atlas-based segmentation of brainstem regions in neuromelanin-sensitive magnetic resonance images.
Proceedings of the Medical Imaging 2015: Computer-Aided Diagnosis, 2015

Quantification of the 3D collagen network geometry in confocal reflection microscopy.
Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

Characterization of the role of collagen network structure and composition in cancer cell migration.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2014
A Novel Automated Microscopy Platform for Multiresolution Multispectral Early Detection of Lung Cancer Cells in Bronchoalveolar Lavage Samples.
IEEE Syst. J., 2014

A benchmark for comparison of cell tracking algorithms.
Bioinform., 2014

2013
Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan-Vese Model.
IEEE Trans. Medical Imaging, 2013

Individual nodule tracking in micro-CT images of a longitudinal lung cancer mouse model.
Medical Image Anal., 2013

Modeling airway probability.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Automatic quantification of filopodia-based cell migration.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Registration of multiple stained histological sections.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

2012
Quantification of Lung Damage in an Elastase-Induced Mouse Model of Emphysema.
Int. J. Biomed. Imaging, 2012

Wavelet-based detection of transcriptional activity on a novel Staphylococcus aureus tiling microarray.
BMC Bioinform., 2012

Detecting airway remodeling in COPD and emphysema using low-dose CT imaging.
Proceedings of the Medical Imaging 2012: Computer-Aided Diagnosis, San Diego, 2012

Individual nodule tracking in micro-CT images of a mouse model of lung cancer.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Fast tracking of fluorescent cells based on the Chan-Vese model.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Characterization of emphysema in low dose computed tomography images using maximum likelihood estimation of the scale exponent.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2010
Spatially Variant Convolution With Scaled B-Splines.
IEEE Trans. Image Process., 2010

Fast Space-Variant Elliptical Filtering Using Box Splines.
IEEE Trans. Image Process., 2010

Fast detection of cells using a continuously scalable Mexican-hat-like template.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Automatic leakage detection and recovery for airway tree extraction in chest CT images.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

2009
Combination Strategies in Multi-Atlas Image Segmentation: Application to Brain MR Data.
IEEE Trans. Medical Imaging, 2009

A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms.
Proceedings of the Image Analysis, 16th Scandinavian Conference, 2009

Segmentation of Touching Cell Nuclei Using a Two-Stage Graph Cut Model.
Proceedings of the Image Analysis, 16th Scandinavian Conference, 2009

2008
Efficient classifier generation and weighted voting for atlas-based segmentation: two small steps faster and closer to the combination oracle.
Proceedings of the Medical Imaging 2008: Image Processing, 2008

Automation of the detection of lung cancer cells in minimal samples of bronchioalveolar lavage.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Fast adaptive elliptical filtering using box splines.
Proceedings of the International Conference on Image Processing, 2008

2007
Restoration of Micro-Ct Images Using Locally Adaptive B-Spline Smoothing.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

Restoration of Biomedical Images using Locally Adaptive B-Spline Smoothing.
Proceedings of the International Conference on Image Processing, 2007

2006
Locally adaptive smoothing method based on B-splines.
Proceedings of the Computational Modeling of Objects Represented in Images-Fundamentals, 2006

2002
<sub>p</sub>-multiresolution analysis: how to reduce ringing and sparsify the error.
IEEE Trans. Image Process., 2002

Continuous wavelet transform with arbitrary scales and O(N) complexity.
Signal Process., 2002

2001
Least-squares image resizing using finite differences.
IEEE Trans. Image Process., 2001

2000
Spline kernels for continuous-space image processing.
Proceedings of the IEEE International Conference on Acoustics, 2000

Non-uniform to uniform grid conversion using least-squares splines.
Proceedings of the 10th European Signal Processing Conference, 2000

1999
Efficient Image Resizing Using Finite Differences.
Proceedings of the 1999 International Conference on Image Processing, 1999


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