Armando J. Pinho

Orcid: 0000-0002-9164-0016

Affiliations:
  • University of Aveiro, IEETA, Portugal


According to our database1, Armando J. Pinho authored at least 135 papers between 1994 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Improving the Generation of Viral Consensus Sequences Using Adaptive Models.
Proceedings of the 32nd European Signal Processing Conference, 2024

Asensitive Compression-Based Method for Filtering Targeted FASTQ Sequencing Reads.
Proceedings of the 32nd European Signal Processing Conference, 2024

A Sorting Tool for Improving FASTA Data Compression Tools.
Proceedings of the 32nd European Signal Processing Conference, 2024

An experimental sorting method for improving metagenomic data encoding.
Proceedings of the Data Compression Conference, 2024

Copy models for protein sequence compression.
Proceedings of the Data Compression Conference, 2024

2023
Concentration of inverted repeats along human DNA.
J. Integr. Bioinform., July, 2023

JARVIS2: a data compressor for large genome sequences.
Proceedings of the Data Compression Conference, 2023

2022
Genomic Regions with Atypical Concentration of Inverted Repeats.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2022

2021
Statistical n-Best AFD-Based Sparse Representation for ECG Biometric Identification.
IEEE Trans. Instrum. Meas., 2021

On the Impact of the Data Acquisition Protocol on ECG Biometric Identification.
Sensors, 2021

Automatic analysis of artistic paintings using information-based measures.
Pattern Recognit., 2021

AC2: An Efficient Protein Sequence Compression Tool Using Artificial Neural Networks and Cache-Hash Models.
Entropy, 2021

2020
GTO: A toolkit to unify pipelines in genomic and proteomic research.
SoftwareX, 2020

Multimodal Emotion Evaluation: A Physiological Model for Cost-Effective Emotion Classification.
Sensors, 2020

Competitive Segmentation Performance on Near-Lossless and Lossy Compressed Remote Sensing Images.
IEEE Geosci. Remote. Sens. Lett., 2020

2019
A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models.
Entropy, 2019

Computing the Scope of Applicability for Acquired Task Knowledge in Experience-Based Planning Domains.
CoRR, 2019

Learning Task Knowledge and its Scope of Applicability in Experience-Based Planning Domains.
CoRR, 2019

Cryfa: a secure encryption tool for genomic data.
Bioinform., 2019

GeCo2: An Optimized Tool for Lossless Compression and Analysis of DNA Sequences.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2019

Visualization of Similar Primer and Adapter Sequences in Assembled Archaeal Genomes.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2019

Detection and Characterization of Local Inverted Repeats Regularities.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2019

Learning the Scope of Applicability for Task Planning Knowledge in Experience-Based Planning Domains.
Proceedings of the 2019 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2019

A Probabilistic Method to Find and Visualize Distinct Regions in Protein Sequences.
Proceedings of the 27th European Signal Processing Conference, 2019

2018
Extended-alphabet finite-context models.
Pattern Recognit. Lett., 2018

Comparison of Compression-Based Measures with Application to the Evolution of Primate Genomes.
Entropy, 2018

A DNA Sequence Corpus for Compression Benchmark.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

Compression of Amino Acid Sequences.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

NET-ASAR: A Tool for DNA Sequence Search Based on Data Compression.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

An Analysis of Symmetric Words in Human DNA: Adjacent vs Non-adjacent Word Distances.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

Compression-Based Classification of ECG Using First-Order Derivatives.
Proceedings of the Intelligent Technologies for Interactive Entertainment, 2018

Metagenomic composition analysis of sedimentary ancient DNA from the Isle of Wight.
Proceedings of the 26th European Signal Processing Conference, 2018

An Application of Data Compression Models to Handwritten Digit Classification.
Proceedings of the Advanced Concepts for Intelligent Vision Systems, 2018

2017
Learning robot tasks with loops from experiences to enhance robot adaptability.
Pattern Recognit. Lett., 2017

Dissimilar Symmetric Word Pairs in the Human Genome.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Cryfa: A Tool to Compact and Encrypt FASTA Files.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Substitutional Tolerant Markov Models for Relative Compression of DNA Sequences.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

On the Role of Inverted Repeats in DNA Sequence Similarity.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

An approach to robot task learning and planning with loops.
Proceedings of the 2017 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2017

Learning and planning of robot tasks with loops.
Proceedings of the 2017 IEEE International Conference on Autonomous Robot Systems and Competitions, 2017

On the Approximation of the Kolmogorov Complexity for DNA Sequences.
Proceedings of the Pattern Recognition and Image Analysis - 8th Iberian Conference, 2017

Visualization of Distinct DNA Regions of the Modern Human Relatively to a Neanderthal Genome.
Proceedings of the Pattern Recognition and Image Analysis - 8th Iberian Conference, 2017

Impact of the Acquisition Time on ECG Compression-Based Biometric Identification Systems.
Proceedings of the Pattern Recognition and Image Analysis - 8th Iberian Conference, 2017

2016
Analysis-Driven Lossy Compression of DNA Microarray Images.
IEEE Trans. Medical Imaging, 2016

Progressive Lossy-to-Lossless Compression of DNA Microarray Images.
IEEE Signal Process. Lett., 2016

Experience-Based Planning Domains: an Integrated Learning and Deliberation Approach for Intelligent Robots - Robot Task Learning from Human Instructions.
J. Intell. Robotic Syst., 2016

A Survey on Data Compression Methods for Biological Sequences.
Inf., 2016

Efficient Compression of Genomic Sequences.
Proceedings of the 2016 Data Compression Conference, 2016

Authorship Attribution Using Relative Compression.
Proceedings of the 2016 Data Compression Conference, 2016

Experience-Based Robot Task Learning and Planning with Goal Inference.
Proceedings of the Twenty-Sixth International Conference on Automated Planning and Scheduling, 2016

2015
Three minimal sequences found in Ebola virus genomes and absent from human DNA.
Bioinform., 2015

Planning with Activity Schemata: Closing the Loop in Experience-Based Planning.
Proceedings of the 2015 IEEE International Conference on Autonomous Robot Systems and Competitions, 2015

ECG biometric identification: A compression based approach.
Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2014
On Entropy-Based Data Mining.
Proceedings of the Interactive Knowledge Discovery and Data Mining in Biomedical Informatics, 2014

MFCompress: a compression tool for FASTA and multi-FASTA data.
Bioinform., 2014

A New Compressor for Measuring Distances among Images.
Proceedings of the Image Analysis and Recognition - 11th International Conference, 2014

A Method to Detect Repeated Unknown Patterns in an Image.
Proceedings of the Image Analysis and Recognition - 11th International Conference, 2014

The natural scale of signals: Pulse duration and superoscillations.
Proceedings of the IEEE International Conference on Acoustics, 2014

Compression-based normal similarity measures for DNA sequences.
Proceedings of the IEEE International Conference on Acoustics, 2014

Gathering and Conceptualizing Plan-Based Robot Activity Experiences.
Proceedings of the Intelligent Autonomous Systems 13, 2014

Exploring deep Markov models in genomic data compression using sequence pre-analysis.
Proceedings of the 22nd European Signal Processing Conference, 2014

Compression of microarray images using a binary tree decomposition.
Proceedings of the 22nd European Signal Processing Conference, 2014

A Conditional Compression Distance that Unveils Insights of the Genomic Evolution.
Proceedings of the Data Compression Conference, 2014

Information Profiles for DNA Pattern Discovery.
Proceedings of the Data Compression Conference, 2014

2013
A Compression Model for DNA Multiple Sequence Alignment Blocks.
IEEE Trans. Inf. Theory, 2013

A Genomic Distance for Assembly Comparison Based on Compressed Maximal Exact Matches.
IEEE ACM Trans. Comput. Biol. Bioinform., 2013

Inter-STOP symbol distances for the identification of coding regions.
J. Integr. Bioinform., 2013

The Rank of Random Binary Matrices and Distributed Storage Applications.
IEEE Commun. Lett., 2013

Bacterial DNA Sequence Compression Models Using Artificial Neural Networks.
Entropy, 2013

Segmentation of DNA into Coding and Noncoding Regions Based on Inter-STOP Symbols Distances.
Proceedings of the 7th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2013


2012
Exon: A Web-Based Software Toolkit for DNA Sequence Analysis.
Proceedings of the 6th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2012

On the Detection of Unknown Locally Repeating Patterns in Images.
Proceedings of the Image Analysis and Recognition - 9th International Conference, 2012

Compression of Whole Genome Alignments Using a Mixture of Finite-Context Models.
Proceedings of the Image Analysis and Recognition - 9th International Conference, 2012

Computation of the Normalized Compression Distance of DNA Sequences using a Mixture of Finite-context Models.
Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2011
Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions.
J. Integr. Bioinform., 2011

Complexity Profiles of DNA Sequences Using Finite-Context Models.
Proceedings of the Information Quality in e-Health, 2011

Compressing the Human Genome Using Exclusively Markov Models.
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011

Distances between Dinucleotides in the Human Genome.
Proceedings of the 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2011

Image similarity using the normalized compression distance based on finite context models.
Proceedings of the 18th IEEE International Conference on Image Processing, 2011

Random block-angular matrices for distributed data storage.
Proceedings of the IEEE International Conference on Acoustics, 2011

Symbolic to numerical conversion of DNA sequences using finite-context models.
Proceedings of the 19th European Signal Processing Conference, 2011

Finding unknown repeated patterns in images.
Proceedings of the 19th European Signal Processing Conference, 2011

2010
Exploring Homology Using the Concept of Three-State Entropy Vector.
Proceedings of the Pattern Recognition in Bioinformatics, 2010

2009
Lossless Compression of Microarray Images Using Image-Dependent Finite-Context Models.
IEEE Trans. Medical Imaging, 2009

On finding minimal absent words.
BMC Bioinform., 2009

Genome analysis with inter-nucleotide distances.
Bioinform., 2009

DNA coding using finite-context models and arithmetic coding.
Proceedings of the IEEE International Conference on Acoustics, 2009

Progressive lossless compression of medical images.
Proceedings of the IEEE International Conference on Acoustics, 2009

Autonomous Configuration of Parameters in Robotic Digital Cameras.
Proceedings of the Pattern Recognition and Image Analysis, 4th Iberian Conference, 2009

Variable Order Finite-Context Models in DNA Sequence Coding.
Proceedings of the Pattern Recognition and Image Analysis, 4th Iberian Conference, 2009

2008
Inverted-repeats-aware finite-context models for DNA coding.
Proceedings of the 2008 16th European Signal Processing Conference, 2008

A bitplane based algorithm for lossless compression of DNA microarray images.
Proceedings of the 2008 16th European Signal Processing Conference, 2008

2007
An Omnidirectional Vision System for Soccer Robots.
Proceedings of the Progress in Artificial Intelligence, 2007

2006
On the use of standards for microarray lossless image compression.
IEEE Trans. Biomed. Eng., 2006

A Three-State Model for DNA Protein-Coding Regions.
IEEE Trans. Biomed. Eng., 2006

On the relation between Memon's and the modified Zeng's palette reordering methods.
Image Vis. Comput., 2006

Lossy-to-Lossless Compression of Images Based on Binary Tree Decomposition.
Proceedings of the International Conference on Image Processing, 2006

Lossless Compression of Microarray Images.
Proceedings of the International Conference on Image Processing, 2006

A Bit-Plane Approach for Lossless Compression of Color-Quantized Images.
Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

Exploring Three-Base Periodicity for DNA Compression and Modeling.
Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

2005
Enhancing the Reactivity of the Vision Subsystem in Autonomous Mobile Robots Using Real-Time Techniques.
Proceedings of the RoboCup 2005: Robot Soccer World Cup IX, 2005

A context adaptation model for the compression of images with a reduced number of colors.
Proceedings of the 2005 International Conference on Image Processing, 2005

2004
A survey on palette reordering methods for improving the compression of color-indexed images.
IEEE Trans. Image Process., 2004

A note on Zeng's technique for color reindexing of palette-based images.
IEEE Signal Process. Lett., 2004

Palette reordering under an exponential power distribution model of prediction residuals.
Proceedings of the 2004 International Conference on Image Processing, 2004

Evaluation of Some Reordering Techniques for Image VQ Index Compression.
Proceedings of the Image Analysis and Recognition: International Conference, 2004

Lossless Compression of Color-Quantized Images Using Block-Based Palette Reordering.
Proceedings of the Image Analysis and Recognition: International Conference, 2004

2003
Block-based histogram packing of color-quantized images.
Proceedings of the 2003 IEEE International Conference on Multimedia and Expo, 2003

JPEG 2000 coding of color-quantized images.
Proceedings of the 2003 International Conference on Image Processing, 2003

On the Efficiency of Luminance-Based Palette Reordering of Color-Quantized Images.
Proceedings of the Pattern Recognition and Image Analysis, First Iberian Conference, 2003

2002
An online preprocessing technique for improving the lossless compression of images with sparse histograms.
IEEE Signal Process. Lett., 2002

Why does histogram packing improve lossless compression rates?
IEEE Signal Process. Lett., 2002

Preprocessing techniques for improving the lossless compression of images with quasi-sparse and locally sparse histograms.
Proceedings of the 2002 IEEE International Conference on Multimedia and Expo, 2002

A comparison of methods for improving the lossless compression of images with sparse histograms.
Proceedings of the 2002 International Conference on Image Processing, 2002

Improvement of the lossless compression of images with quasi-sparse histograms.
Proceedings of the 11th European Signal Processing Conference, 2002

Histogram packing, total variation, and lossless image compression.
Proceedings of the 11th European Signal Processing Conference, 2002

2001
Adaptive context-based arithmetic coding of arbitrary contour maps.
IEEE Signal Process. Lett., 2001

On the impact of histogram sparseness on some lossless image compression techniques.
Proceedings of the 2001 International Conference on Image Processing, 2001

Region-based near-lossless image compression.
Proceedings of the IEEE International Conference on Acoustics, 2001

2000
A JBIG-based approach to the encoding of contour maps.
IEEE Trans. Image Process., 2000

Constrained and Unconstrained Simplification of Image Partitions Encoded with the Method of Transition Points.
Proceedings of the 2000 International Conference on Image Processing, 2000

High Quality Region-Based Video Coding.
Proceedings of the 2000 International Conference on Image Processing, 2000

Simplification of image partitions for region-based image coding.
Proceedings of the 10th European Signal Processing Conference, 2000

1999
Encoding of image partitions using a standard technique for lossless image compression.
Proceedings of the 1999 IEEE International Conference on Acoustics, 1999

1998
A method for encoding region boundaries based on transition points.
Image Vis. Comput., 1998

Encoding of Closed Boundaries using Transition Points.
Proceedings of the 1998 IEEE International Conference on Image Processing, 1998

1997
Contextual Edge Detection Using a Recurrent Neural Network.
Proceedings of the Image Analysis and Processing, 9th International Conference, 1997

1996
Estudo sobre a aplicação de redes neuronais à detecção de contornos em imagens
PhD thesis, 1996

An example of tuned neural network based noise reduction filters for images.
Proceedings of International Conference on Neural Networks (ICNN'96), 1996

Figures of merit for quality assessment of binary edge maps.
Proceedings of the Proceedings 1996 International Conference on Image Processing, 1996

On the partition of binary edge maps as a first step for quantitative quality evaluation.
Proceedings of the Proceedings 1996 International Conference on Image Processing, 1996

1995
Edge Detection Filters Based on Artificial Neural Networks.
Proceedings of the Image Analysis and Processing, 8th International Conference, 1995

1994
Some Results on Edge Enhancement with Neural Networks.
Proceedings of the Proceedings 1994 International Conference on Image Processing, 1994

Errorless Restoration Algorithms for Band-limited Images.
Proceedings of the Proceedings 1994 International Conference on Image Processing, 1994


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