Ariya Shajii

According to our database, Ariya Shajii authored at least 7 papers between 2016 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

Vectron: A Dynamic Programming Auto-vectorization Framework.

Sourena Naser Moghaddasi, Haris Smajlovic, Ariya Shajii, Ibrahim Numanagic

Proceedings of the 23rd ACM/IEEE International Symposium on Code Generation and Optimization, 2025

2023

Codon: A Compiler for High-Performance Pythonic Applications and DSLs.

Ariya Shajii, Gabriel Ramirez, Haris Smajlovic, Jessica Ray, Bonnie Berger, Saman P. Amarasinghe, Ibrahim Numanagic

Proceedings of the 32nd ACM SIGPLAN International Conference on Compiler Construction, 2023

2022

Sequre: a high-performance framework for rapid development of secure bioinformatics pipelines.

Haris Smajlovic, Ariya Shajii, Bonnie Berger, Hyunghoon Cho, Ibrahim Numanagic

Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2022

2021

High-Performance Computational Genomics.

Ariya Shajii

PhD thesis, 2021

2019

Seq: a high-performance language for bioinformatics.

Ariya Shajii, Ibrahim Numanagic, Riyadh Baghdadi, Bonnie Berger, Saman P. Amarasinghe

Proc. ACM Program. Lang., 2019

2018

Latent Variable Model for Aligning Barcoded Short-Reads Improves Downstream Analyses.

Ariya Shajii, Ibrahim Numanagic, Bonnie Berger

Proceedings of the Research in Computational Molecular Biology, 2018

2016

Fast genotyping of known SNPs through approximate <i>k</i>-mer matching.

Ariya Shajii, Deniz Yörükoglu, Yun William Yu, Bonnie Berger

Bioinform., 2016