Antoine Limasset

According to our database, Antoine Limasset authored at least 16 papers between 2015 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Locality-preserving minimal perfect hashing of <i>k</i>-mers.

Giulio Ermanno Pibiri, Yoshihiro Shibuya, Antoine Limasset

Bioinform., 2023

Scalable sequence database search using partitioned aggregated Bloom comb trees.

Camille Marchet, Antoine Limasset

Bioinform., 2023

Fractional Hitting Sets for Efficient and Lightweight Genomic Data Sketching.

Timothé Rouzé, Igor Martayan, Camille Marchet, Antoine Limasset

Proceedings of the 23rd International Workshop on Algorithms in Bioinformatics, 2023

2022

Locality-Preserving Minimal Perfect Hashing of k-mers.

Giulio Ermanno Pibiri, Yoshihiro Shibuya, Antoine Limasset

CoRR, 2022

Toward Optimal Fingerprint Indexing for Large Scale Genomics.

Clément Agret, Bastien Cazaux, Antoine Limasset

Proceedings of the 22nd International Workshop on Algorithms in Bioinformatics, 2022

2021

BLight: efficient exact associative structure for k-mers.

Camille Marchet, Maël Kerbiriou, Antoine Limasset

Bioinform., 2021

2020

A resource-frugal probabilistic dictionary and applications in bioinformatics.

Camille Marchet, Lolita Lecompte, Antoine Limasset, Lucie Bittner, Pierre Peterlongo

Discret. Appl. Math., 2020

Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs.

Antoine Limasset, Jean-François Flot, Pierre Peterlongo

Bioinform., 2020

2017

Novel approaches for the exploitation of high throughput sequencing data. (Nouvelles approches pour l'exploitation des données de sequençage haut débit).

Antoine Limasset

PhD thesis, 2017

Toward perfect reads.

Antoine Limasset, Jean-François Flot, Pierre Peterlongo

CoRR, 2017

Fast and Scalable Minimal Perfect Hashing for Massive Key Sets.

Antoine Limasset, Guillaume Rizk, Rayan Chikhi, Pierre Peterlongo

Proceedings of the 16th International Symposium on Experimental Algorithms, 2017

2016

Read mapping on de Bruijn graphs.

Antoine Limasset, Bastien Cazaux, Eric Rivals, Pierre Peterlongo

BMC Bioinform., 2016

Compacting de Bruijn graphs from sequencing data quickly and in low memory.

Rayan Chikhi, Antoine Limasset, Paul Medvedev

Bioinform., 2016

A Resource-frugal Probabilistic Dictionary and Applications in (Meta)Genomics.

Camille Marchet, Antoine Limasset, Lucie Bittner, Pierre Peterlongo

Proceedings of the Prague Stringology Conference 2016, 2016

2015

On the Representation of De Bruijn Graphs.

Rayan Chikhi, Antoine Limasset, Shaun Jackman, Jared T. Simpson, Paul Medvedev

J. Comput. Biol., 2015

Read Mapping on de Bruijn graph.

Antoine Limasset, Pierre Peterlongo

CoRR, 2015