Anthony T. Papenfuss

According to our database, Anthony T. Papenfuss authored at least 10 papers between 2014 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

cellsig plug-in enhances CIBERSORTx signature selection for multidataset transcriptomes with sparse multilevel modelling.

Md. Abdullah-Al-Kamran Khan, Jian Wu, Yuhan Sun, Alexander D. Barrow, Anthony T. Papenfuss, Stefano Mangiola

Bioinform., December, 2023

A systematic review of computational methods for designing efficient guides for CRISPR DNA base editor systems.

Göknur Giner, Saima Ikram, Marco J. Herold, Anthony T. Papenfuss

Briefings Bioinform., July, 2023

2022

StructuralVariantAnnotation: a R/Bioconductor foundation for a caller-agnostic structural variant software ecosystem.

Daniel Cameron, Ruining Dong, Anthony T. Papenfuss

Bioinform., 2022

2021

Interfacing Seurat with the R tidy universe.

Stefano Mangiola, Maria A. Doyle, Anthony T. Papenfuss

Bioinform., November, 2021

VIRUSBreakend: Viral Integration Recognition Using Single Breakends.

Daniel Cameron, Nina Jacobs, Paul Roepman, Peter Priestley, Edwin Cuppen, Anthony T. Papenfuss

Bioinform., 2021

2020

tidyHeatmap: an R package for modular heatmap production based on tidy principles.

Stefano Mangiola, Anthony T. Papenfuss

J. Open Source Softw., 2020

2017

CLOVE: classification of genomic fusions into structural variation events.

Jan Schröder, Adrianto Wirawan, Bertil Schmidt, Anthony T. Papenfuss

BMC Bioinform., 2017

Canary: an atomic pipeline for clinical amplicon assays.

Kenneth D. Doig, Jason Ellul, Andrew Fellowes, Ella R. Thompson, Georgina L. Ryland, Piers Blombery, Anthony T. Papenfuss, Stephen B. Fox

BMC Bioinform., 2017

HYSYS: have you swapped your samples?

Jan Schröder, Vincent Corbin, Anthony T. Papenfuss

Bioinform., 2017

2014

Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads.

Jan Schröder, Arthur L. Hsu, Samantha E. Boyle, Geoff MacIntyre, Marek Cmero, Richard W. Tothill, Ricky W. Johnstone, Mark Shackleton, Anthony T. Papenfuss

Bioinform., 2014