Anthony N. Nguyen

Orcid: 0000-0002-6215-6954

According to our database1, Anthony N. Nguyen authored at least 75 papers between 2001 and 2025.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2025
Generating synthetic clinical text with local large language models to identify misdiagnosed limb fractures in radiology reports.
Artif. Intell. Medicine, 2025

2024
Analyzing pain patterns in the emergency department: Leveraging clinical text deep learning models for real-world insights.
Int. J. Medical Informatics, 2024

e-Health CSIRO at RRG24: Entropy-Augmented Self-Critical Sequence Training for Radiology Report Generation.
Proceedings of the 23rd Workshop on Biomedical Natural Language Processing, 2024

e-Health CSIRO at "Discharge Me!" 2024: Generating Discharge Summary Sections with Fine-tuned Language Models.
Proceedings of the 23rd Workshop on Biomedical Natural Language Processing, 2024

2023
Automated ICD coding using extreme multi-label long text transformer-based models.
Artif. Intell. Medicine, October, 2023

Attention-based multimodal fusion with contrast for robust clinical prediction in the face of missing modalities.
J. Biomed. Informatics, September, 2023

Improving Text-based Early Prediction by Distillation from Privileged Time-Series Text.
CoRR, 2023

Developing Robust Clinical Text Deep Learning Models - A "Painless" Approach.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

Uncovering Variations in Clinical Notes for NLP Modeling.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

Catching Misdiagnosed Limb Fractures in the Emergency Department Using Cross-institution Transfer Learning.
Proceedings of the 21st Annual Workshop of the Australasian Language Technology Association, 2023

Enhancing Bacterial Infection Prediction in Critically Ill Patients by Integrating Clinical Text.
Proceedings of the 21st Annual Workshop of the Australasian Language Technology Association, 2023

2022
"Note Bloat" impacts deep learning-based NLP models for clinical prediction tasks.
J. Biomed. Informatics, 2022

De-identifying Australian hospital discharge summaries: An end-to-end framework using ensemble of deep learning models.
J. Biomed. Informatics, 2022

Hierarchical label-wise attention transformer model for explainable ICD coding.
J. Biomed. Informatics, 2022

2021
Early prediction of diagnostic-related groups and estimation of hospital cost by processing clinical notes.
npj Digit. Medicine, 2021

De-identifying Hospital Discharge Summaries: An End-to-End Framework using Ensemble of De-Identifiers.
CoRR, 2021

2020
Matching patients to clinical trials using semantically enriched document representation.
J. Biomed. Informatics, 2020

A Label Attention Model for ICD Coding from Clinical Text.
Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

2019
Quantifying semantic similarity of clinical evidence in the biomedical literature to facilitate related evidence synthesis.
J. Biomed. Informatics, 2019

Extracting tumour prognostic factors from a diverse electronic record dataset in genito-urinary oncology.
Int. J. Medical Informatics, 2019

A Decision Support System for Pathology Test Result Reviews in an Emergency Department to Support Patient Safety and Increase Efficiency.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

Identifying Patients with Pain in Emergency Departments using Conventional Machine Learning and Deep Learning.
Proceedings of the The 17th Annual Workshop of the Australasian Language Technology Association, 2019

2018
Transferability of artificial neural networks for clinical document classification across hospitals: A case study on abnormality detection from radiology reports.
J. Biomed. Informatics, 2018

Extracting cancer mortality statistics from death certificates: A hybrid machine learning and rule-based approach for common and rare cancers.
Artif. Intell. Medicine, 2018

Knowledge-based Feature Engineering for Detecting Medication and Adverse Drug Events from Electronic Health Records.
Proceedings of the 1st International Workshop on Medication and Adverse Drug Event Detection, 2018

Improving Recurrent Neural Networks with Predictive Propagation for Sequence Labelling.
Proceedings of the Neural Information Processing - 25th International Conference, 2018

Identifying Risk Factors For Heart Disease in Electronic Medical Records: A Deep Learning Approach.
Proceedings of the BioNLP 2018 workshop, Melbourne, Australia, July 19, 2018, 2018

Computer-Assisted Diagnostic Coding: Effectiveness of an NLP-based approach using SNOMED CT to ICD-10 mappings.
Proceedings of the AMIA 2018, 2018

Clinical Document Classification Using Labeled and Unlabeled Data Across Hospitals.
Proceedings of the AMIA 2018, 2018

Extracting Cancer Mortality Statistics from Free-text Death Certificates: A View from the Trenches.
Proceedings of the 23rd Australasian Document Computing Symposium, 2018

2017
Clinical information extraction using small data: An active learning approach based on sequence representations and word embeddings.
J. Assoc. Inf. Sci. Technol., 2017

Active learning reduces annotation time for clinical concept extraction.
Int. J. Medical Informatics, 2017

Automatic Diagnosis Coding of Radiology Reports: A Comparison of Deep Learning and Conventional Classification Methods.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

2016
Active learning: a step towards automating medical concept extraction.
J. Am. Medical Informatics Assoc., 2016

Automated Cancer Registry Notifications: Validation of a Medical Text Analytics System for Identifying Patients with Cancer from a State-Wide Pathology Repository.
Proceedings of the AMIA 2016, 2016

The Benefits of Word Embeddings Features for Active Learning in Clinical Information Extraction.
Proceedings of the Australasian Language Technology Association Workshop 2016, Melbourne, Australia, December 5, 2016

Evaluation of Medical Concept Annotation Systems on Clinical Records.
Proceedings of the Australasian Language Technology Association Workshop 2016, Melbourne, Australia, December 5, 2016

2015
Automatic classification of diseases from free-text death certificates for real-time surveillance.
BMC Medical Informatics Decis. Mak., 2015

Automatic ICD-10 classification of cancers from free-text death certificates.
Int. J. Medical Informatics, 2015

Automatic detection of tweets reporting cases of influenza like illnesses in Australia.
Health Inf. Sci. Syst., 2015

UQeResearch: Semantic Textual Similarity Quantification.
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015

External Knowledge and Query Strategies in Active Learning: a Study in Clinical Information Extraction.
Proceedings of the 24th ACM International Conference on Information and Knowledge Management, 2015

CADEminer: A System for Mining Consumer Reports on Adverse Drug Side Effects.
Proceedings of the Eighth Workshop on Exploiting Semantic Annotations in Information Retrieval, 2015

Assessing the Utility of Automatic Cancer Registry Notifications Data Extraction from Free-Text Pathology Reports.
Proceedings of the AMIA 2015, 2015

Automated Reconciliation of Radiology Reports and Discharge Summaries.
Proceedings of the AMIA 2015, 2015

Oyster: A Tool for Fine-Grained Ontological Annotations in Free-Text.
Proceedings of the Information Retrieval Technology, 2015

Analysis of Word Embeddings and Sequence Features for Clinical Information Extraction.
Proceedings of the Australasian Language Technology Association Workshop, 2015

Similarity Metrics for Clustering PubMed Abstracts for Evidence Based Medicine.
Proceedings of the Australasian Language Technology Association Workshop, 2015

2014
De-identification of health records using Anonym: Effectiveness and robustness across datasets.
Artif. Intell. Medicine, 2014

Load Balancing for Imbalanced Data Sets: Classifying Scientific Artefacts for Evidence Based Medicine.
Proceedings of the PRICAI 2014: Trends in Artificial Intelligence, 2014

Factors Influencing Robustness and Effectiveness of Conditional Random Fields in Active Learning Frameworks.
Proceedings of the Twelfth Australasian Data Mining Conference, AusDM 2014, Brisbane, 2014

Medical Free-Text to Concept Mapping as an Information Retrieval Problem.
Proceedings of the 2014 Australasian Document Computing Symposium, 2014

2013
Retrieval of Health Advice on the Web AEHRC at ShARe/CLEF eHealth Evaluation Lab Task 3.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Identify Disorders in Health Records using Conditional Random Fields and Metamap AEHRC at ShARe/CLEF 2013 eHealth Evaluation Lab Task 1.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Towards a Visually Enhanced Medical Search Engine.
Proceedings of the Third Australasian Workshop on Artificial Intelligence in Health (AIH 2013) and the Fourth International Workshop on Collaborative Agents, 2013

Efficient top-k retrieval with signatures.
Proceedings of the Australasian Document Computing Symposium, 2013

2012
Exploiting SNOMED CT Concepts & Relationships for Clinical Information Retrieval: Australian e-Health Research Centre and Queensland University of Technology at the TREC 2012 Medical Track.
Proceedings of The Twenty-First Text REtrieval Conference, 2012

The impact of OCR accuracy on automated cancer classification of pathology reports.
Proceedings of the Health Informatics: Building a Healthcare Future Through Trusted Information, 2012

Classification of pathology reports for cancer registry notifications.
Proceedings of the Health Informatics: Building a Healthcare Future Through Trusted Information, 2012

Exploiting medical hierarchies for concept-based information retrieval.
Proceedings of the Seventeenth Australasian Document Computing Symposium, 2012

Semantic Judgement of Medical Concepts: Combining Syntagmatic and Paradigmatic Information with the Tensor Encoding Model.
Proceedings of the Australasian Language Technology Association Workshop, 2012

2011
Automatic Extraction of Cancer Characteristics from Free-Text Pathology Reports for Cancer Notifications.
Proceedings of the Health Informatics: The Transformative Power of Innovation, 2011

2010
Symbolic rule-based classification of lung cancer stages from free-text pathology reports.
J. Am. Medical Informatics Assoc., 2010

2008
Assuring Authenticity of Digital Mammograms by Image Watermarking.
Proceedings of the Digital Mammography, 2008

2007
Application of Information Technology: Collection of Cancer Stage Data by Classifying Free-text Medical Reports.
J. Am. Medical Informatics Assoc., 2007

2006
Gaze tracking for region of interest coding in JPEG 2000.
Signal Process. Image Commun., 2006

2005
Integrating Text Retrieval and Image Retrieval in XML Document Searching.
Proceedings of the Advances in XML Information Retrieval and Evaluation, 2005

Object Recognition Using Stereo Vision and Higher Order Spectra.
Proceedings of the International Conference on Digital Image Computing: Techniques and Applications, 2005

2004
Importance prioritisation in JPEG 2000 for improved interpretability.
Signal Process. Image Commun., 2004

Visual attention based roi maps from gaze tracking data.
Proceedings of the 2004 International Conference on Image Processing, 2004

2003
Interpretability performance assessment of JPEG2000 and part 1 compliant region of interest coding.
IEEE Trans. Consumer Electron., 2003

Importance prioritization coding in JPEG2000 for interpretability with application to surveillance imagery.
Proceedings of the Visual Communications and Image Processing 2003, 2003

2002
Progressive coding in JPEG2000 - improving content recognition performance using ROIs and importance maps.
Proceedings of the 11th European Signal Processing Conference, 2002

2001
Importance coding of surveillance imagery for interpretability using quadtree dynamic importance maps.
Proceedings of the Sixth International Symposium on Signal Processing and its Applications, 2001

Importance coding of still imagery based on importance maps of visually interpretable regions.
Proceedings of the 2001 International Conference on Image Processing, 2001


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