Anthony A. Philippakis

According to our database, Anthony A. Philippakis authored at least 13 papers between 2005 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2022

The <i>All of Us</i> Research Program: Data quality, utility, and diversity.

Andrea H. Ramirez, Lina M. Sulieman, David J. Schlueter, Alese E. Halvorson, Jun Qian, Francis Ratsimbazafy, Roxana Loperena-Cortes, Kelsey R. Mayo, Melissa A. Basford, Nicole Deflaux, Karthik Muthuraman, Karthik Natarajan, Abel N. Kho, Hua Xu, Consuelo H. Wilkins, Hoda Anton-Culver, Eric Boerwinkle, Mine Cicek, Cheryl R. Clark, Elizabeth Cohn, Lucila Ohno-Machado, Sheri D. Schully, Brian K. Ahmedani, Maria Argos, Robert M. Cronin, Christopher J. O'Donnell, Mona Fouad, David B. Goldstein, Philip Greenland, Scott J. Hebbring, Elizabeth W. Karlson, Parinda Khatri, Bruce Korf, Jordan W. Smoller, Stephen Sodeke, John Wilbanks, Justin Hentges, Stephen Mockrin, Christopher Lunt, Stephanie A. Devaney, Kelly Gebo, Joshua C. Denny, Robert J. Carroll, David Glazer, Paul A. Harris, George Hripcsak, Anthony A. Philippakis, Dan M. Roden

Patterns, 2022

Cohort design and natural language processing to reduce bias in electronic health records research.

Shaan Khurshid, Christopher Reeder, Lia X. Harrington, Pulkit Singh, Gopal Sarma, Samuel F. Friedman, Paolo Di Achille, Nathaniel Diamant, Jonathan W. Cunningham, Ashby C. Turner, Emily S. Lau, Julian S. Haimovich, Mostafa A. Al-Alusi, Xin Wang, Marcus D. R. Klarqvist, Jeffrey M. Ashburner, Christian Diedrich, Mercedeh Ghadessi, Johanna Mielke, Hanna M. Eilken, Alice McElhinney, Andrea Derix, Steven J. Atlas, Patrick T. Ellinor, Anthony A. Philippakis, Christopher D. Anderson, Jennifer E. Ho, Puneet Batra, Steven A. Lubitz

npj Digit. Medicine, 2022

STAAR workflow: a cloud-based workflow for scalable and reproducible rare variant analysis.

Sheila M. Gaynor, Kenneth E. Westerman, Lea L. Ackovic, Xihao Li, Zilin Li, Alisa Manning, Anthony A. Philippakis, Xihong Lin

Bioinform., 2022

Assessing the Robustness and Internal Consistency of the Pooled Cohort Equations.

Uri Kartoun, Shaan Khurshid, BC Kwon, Aniruddh P. Patel, Akl Fahed, Puneet Batra, Anthony A. Philippakis, Steven A. Lubitz, Amit V. Khera, Patrick T. Ellinor, Vibha Anand, Kenney Ng

Proceedings of the AMIA 2022, 2022

2021

Selection of 51 predictors from 13, 782 candidate multimodal features using machine learning improves coronary artery disease prediction.

Saaket Agrawal, Marcus D. R. Klarqvist, Connor Emdin, Aniruddh P. Patel, Manish D. Paranjpe, Patrick T. Ellinor, Anthony A. Philippakis, Kenney Ng, Puneet Batra, Amit V. Khera

Patterns, 2021

2020

A structural variation reference for medical and population genetics.

Ryan L. Collins, Harrison Brand, Konrad J. Karczewski, Xuefang Zhao, Jessica Alföldi, Laurent C. Francioli, Amit V. Khera, Chelsea Lowther, Laura D. Gauthier, Harold Wang, Nicholas A. Watts, Matthew Solomonson, Alexander Baumann, Ruchi Munshi, Mark Walker, Christopher W. Whelan, Yongqing Huang, Ted Brookings, Ted Sharpe, Matthew R. Stone, Elise Valkanas, Jack Fu, Grace Tiao, Kristen M. Laricchia, Valentín Ruano-Rubio, Christine Stevens, Namrata Gupta, Caroline Cusick, Lauren Margolin, Irina M. Armean, Eric Banks, Louis Bergelson, Kristian Cibulskis, Kristen M. Connolly, Miguel Covarrubias, Beryl B. Cummings, Mark J. Daly, Stacey Donnelly, Yossi Farjoun, Steven Ferriera, Stacey Gabriel, Jeff Gentry, Thibault Jeandet, Diane Kaplan, Christopher Llanwarne, Eric V. Minikel, Benjamin M. Neale, Sam Novod, Anne H. O'Donnell-Luria, Nikelle Petrillo, Timothy Poterba, David Roazen, Andrea Saltzman, Kaitlin E. Samocha, Molly Schleicher, Cotton Seed, José Soto, Kathleen Tibbetts, Charlotte Tolonen, Christopher Vittal, Gordon Wade, Arcturus Wang, Qingbo Wang, James S. Ware, Ben Weisburd, Nicola Whiffin, Carlos A. Aguilar Salinas, Tariq Ahmad, Christine M. Albert, Diego Ardissino, Gil Atzmon, John Barnard, Laurent Beaugerie, Emelia J. Benjamin, Michael Boehnke, Lori L. Bonnycastle, Erwin P. Bottinger, Donald W. Bowden, Matthew J. Bown, John C. Chambers, Juliana C. Chan, Daniel Chasman, Judy Cho, Mina K. Chung, Bruce Cohen, Adolfo Correa, Dana Dabelea, Dawood Darbar, Ravindranath Duggirala, Josée Dupuis, Patrick T. Ellinor, Roberto Elosua, Jeanette Erdmann, Tõnu Esko, Martti Färkkilä, Jose Florez, Andre Franke, Gad Getz, Benjamin Glaser, Stephen J. Glatt, David Goldstein, Clicerio Gonzalez, Leif Groop, Christopher A. Haiman, Craig Hanis, Matthew Harms, Mikko Hiltunen, Matti M. Holi, Christina M. Hultman, Mikko Kallela, Jaakko Kaprio, Sekar Kathiresan, Bong-Jo Kim, Young Jin Kim, George Kirov, Jaspal Kooner, Seppo Koskinen, Harlan M. Krumholz, Subra Kugathasan, Soo Heon Kwak, Markku Laakso, Terho Lehtimäki, Ruth J. F. Loos, Steven A. Lubitz, Ronald C. W. Ma, Daniel G. MacArthur, Jaume Marrugat, Kari M. Mattila, Steven A. McCarroll, Mark I. McCarthy, Dermot McGovern, Ruth McPherson, James B. Meigs, Olle Melander, Andres Metspalu, Peter M. Nilsson, Michael C. O'Donovan, Dost Öngür, Lorena Orozco, Michael J. Owen, Colin N. A. Palmer, Aarno Palotie, Kyong Soo Park, Carlos Pato, Ann E. Pulver, Nazneen Rahman, Anne M. Remes, John D. Rioux, Samuli Ripatti, Dan M. Roden, Danish Saleheen, Veikko Salomaa, Nilesh J. Samani, Jeremiah Scharf, Heribert Schunkert, Moore B. Shoemaker, Pamela Sklar, Hilkka Soininen, Harry Sokol, Tim Spector, Patrick F. Sullivan, Jaana Suvisaari, E. Shyong Tai, Yik Ying Teo, Tuomi Tiinamaija, Ming Tsuang, Dan Turner, Teresa Tusie-Luna, Erkki Vartiainen, Hugh Watkins, Rinse K. Weersma, Maija Wessman, James G. Wilson, Ramnik J. Xavier, Kent D. Taylor, Henry J. Lin, Stephen S. Rich, Wendy S. Post, Yii-Der Ida Chen, Jerome I. Rotter, Chad Nusbaum, Anthony A. Philippakis, Eric S. Lander, Michael E. Talkowski

Nat., 2020

The All of Us Research Program Researcher Workbench: Cloud based access and analytics to advance precision medicine.

Andrea H. Ramirez, Kelsey R. Mayo, Robert J. Carroll, Karthik Muthuraman, Melissa A. Basford, David Glazer, Paul A. Harris, Anthony A. Philippakis, Dan M. Roden

Proceedings of the AMIA 2020, 2020

The All of Us Research Program Researcher Workbench Phenotype Library: Five Disease Implementations.

Izabelle P. Humes, Roxana Loperena-Cortes, Melissa A. Basford, Kelsey R. Mayo, Joseph DiPaolo, David J. Schlueter, Jun Qian, Wei-Qi Wei, Robert J. Carroll, David Glazer, Paul A. Harris, Anthony A. Philippakis, Dan M. Roden, Andrea H. Ramirez

Proceedings of the AMIA 2020, 2020

2017

The All of Us Research Program Researcher Portal: Innovative access to Unprecendented Data.

Andrea H. Ramirez, Anthony A. Philippakis, Gonçalo R. Abecasis, Paul A. Harris, Joshua C. Denny

Proceedings of the AMIA 2017, 2017

2009

Predicting the binding preference of transcription factors to individual DNA <i>k</i>-mers.

Trevis M. Alleyne, Lourdes Peña Castillo, Gwenael Badis, Shaheynoor Talukder, Michael F. Berger, Andrew R. Gehrke, Anthony A. Philippakis, Martha L. Bulyk, Quaid Morris, Timothy R. Hughes

Bioinform., 2009

2008

Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments.

Anthony A. Philippakis, Aaron M. Qureshi, Michael F. Berger, Martha L. Bulyk

J. Comput. Biol., 2008

2006

Expression-Guided In Silico Evaluation of Candidate <i>Cis</i> Regulatory Codes for <i>Drosophila</i> Muscle Founder Cells.

Anthony A. Philippakis, Brian W. Busser, Stephen S. Gisselbrecht, Fangxue Sherry He, Beatriz Estrada, Alan M. Michelson, Martha L. Bulyk

PLoS Comput. Biol., 2006

2005

ModuleFinder: A Tool for Computational Discovery of Cis Regulatory Modules.

Anthony A. Philippakis, Fangxue Sherry He, Martha L. Bulyk

Proceedings of the Biocomputing 2005, 2005