Anna Bernasconi

Orcid: 0000-0001-8016-5750

Affiliations:
  • Politecnico di Milano, Italy


According to our database1, Anna Bernasconi authored at least 67 papers between 2017 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
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Links

Online presence:

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Bibliography

2024
Italian Legislative Property Graph.
Dataset, May, 2024

Supporting data and code for "Data-driven recombination detection in viral genomes".
Dataset, March, 2024

Supporting data and code for "Data-driven recombination detection in viral genomes".
Dataset, February, 2024

Exploring the evolution of research topics during the COVID-19 pandemic.
Expert Syst. Appl., 2024

MINE GRAPH RULE: A New Cypher-like Operator for Mining Association Rules on Property Graphs.
CoRR, 2024

Modelling Legislative Systems into Property Graphs to Enable Advanced Pattern Detection.
CoRR, 2024

PG-Triggers: Triggers for Property Graphs.
Proceedings of the Companion of the 2024 International Conference on Management of Data, 2024

Towards a Standard for Triggers in Property Graphs.
Proceedings of the 32nd Symposium of Advanced Database Systems, 2024

Reactive Knowledge Management.
Proceedings of the 40th IEEE International Conference on Data Engineering, 2024

Towards an Explorable Conceptual Map of Large Language Models.
Proceedings of the Intelligent Information Systems, 2024

TETYS: Towards the Next-Generation Open-Source Web Topic Explorer.
Proceedings of the Research Projects Exhibition Papers Presented at the 36th International Conference on Advanced Information Systems Engineering(CAiSE 2024), 2024

SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics.
Proceedings of the Research Projects Exhibition Papers Presented at the 36th International Conference on Advanced Information Systems Engineering(CAiSE 2024), 2024

2023
Supporting data and code for "Data-driven recombination detection in viral genomes".
Dataset, November, 2023

Assessing the value of ontologically unpacking a conceptual model for human genomics.
Inf. Syst., September, 2023

PoliViews: A comprehensive and modular approach to the conceptual modeling of genomic data.
Data Knowl. Eng., September, 2023

Supporting data and code for "Data-driven recombination detection in viral genomes".
Dataset, July, 2023

Editorial: Identification of phenotypically important genomic variants.
Frontiers Bioinform., May, 2023

Supporting data for "CoVEffect: Interactive System for Mining the Effects of SARS-CoV-2 Mutations and Variants Based on Deep Learning".
Dataset, April, 2023

Model, Integrate, Search... Repeat - A Sound Approach to Building Integrated Repositories of Genomic Data
Lecture Notes in Business Information Processing 496, Springer, ISBN: 978-3-031-44907-9, 2023

Searching COVID-19 clinical research using graphical abstracts.
CoRR, 2023

PG-Triggers: Triggers for Property Graphs.
CoRR, 2023

VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants.
Database J. Biol. Databases Curation, 2023

The Opportunity of Data-Driven Services for Viral Genomic Surveillance.
Proceedings of the IEEE International Conference on Service-Oriented System Engineering, 2023

OntoEffect: An OntoUML-Based Ontology to Explain SARS-CoV-2 Variants' Effects.
Proceedings of the 15th International Joint Conference on Knowledge Discovery, 2023

A Reference Meta-model to Understand DNA Variant Interpretation Guidelines.
Proceedings of the Conceptual Modeling - 42nd International Conference, 2023

Ontological Representation of FAIR Principles: A Blueprint for FAIRer Data Sources.
Proceedings of the Advanced Information Systems Engineering, 2023

2022
META-BASE: A Novel Architecture for Large-Scale Genomic Metadata Integration.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis.
ACM Trans. Comput. Heal., 2022

Semantic interoperability: ontological unpacking of a viral conceptual model.
BMC Bioinform., 2022

Genomic data integration and user-defined sample-set extraction for population variant analysis.
BMC Bioinform., 2022

ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time.
Bioinform., 2022

GeMI: interactive interface for transformer-based Genomic Metadata Integration.
Database J. Biol. Databases Curation, 2022

Expressing Biological Problems with Logical Reasoning Languages.
Proceedings of the 16th International Rule Challenge and 6th Doctoral Consortium @ RuleML+RR 2022 co-located with 18th Reasoning Web Summer School (RW 2022) and 14th DecisionCAMP 2022 as part of Declarative AI 2022, Berlin, Germany (virtual due to Covid-19 pandemic), 26, 2022

A Sound and Repeatable Approach to Building Integrated Repositories of Genomic Data.
Proceedings of the 1st Italian Conference on Big Data and Data Science (itaDATA 2022), 2022

An Initial Empirical Assessment of an Ontological Model of the Human Genome.
Proceedings of the Advances in Conceptual Modeling, 2022

A Comprehensive Approach for the Conceptual Modeling of Genomic Data.
Proceedings of the Conceptual Modeling - 41st International Conference, 2022

Conceptual models and databases for searching the genome.
Proceedings of the 25th International Conference on Extending Database Technology, 2022

An Ontological Characterization of a Conceptual Model of the Human Genome.
Proceedings of the Intelligent Information Systems, 2022

2021
Analysis of amino acid change dynamics reveals SARS-CoV-2 variant emergence.
Dataset, July, 2021

Model, integrate, search... repeat: a sound approach to building integrated repositories of genomic data.
PhD thesis, 2021

ViruSurf: an integrated database to investigate viral sequences.
Nucleic Acids Res., 2021

A Conceptual Model for Geo-Online Exploratory Data Visualization: The Case of the COVID-19 Pandemic.
Inf., 2021

TOrPEDO: witnessing model correctness with topological proofs.
Formal Aspects Comput., 2021

EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species.
Database J. Biol. Databases Curation, 2021

A review on viral data sources and search systems for perspective mitigation of COVID-19.
Briefings Bioinform., 2021

The road towards data integration in human genomics: players, steps and interactions.
Briefings Bioinform., 2021

Extreme Requirements Elicitation: Lessons Learnt from the COVID-19 Case Study.
Proceedings of the Joint Proceedings of REFSQ 2021 Workshops, 2021

CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts.
Proceedings of the Research Challenges in Information Science, 2021

Ontological Unpacking as Explanation: The Case of the Viral Conceptual Model.
Proceedings of the Conceptual Modeling - 40th International Conference, 2021

2020

Automated Integration of Genomic Metadata with Sequence-to-Sequence Models.
Proceedings of the Machine Learning and Knowledge Discovery in Databases. Applied Data Science and Demo Track, 2020

Integrating Topological Proofs with Model Checking to Instrument Iterative Design.
Proceedings of the Fundamental Approaches to Software Engineering, 2020

Empowering Virus Sequence Research Through Conceptual Modeling.
Proceedings of the Conceptual Modeling - 39th International Conference, 2020

2019
Biological and Medical Ontologies: Systems Biology Ontology (SBO).
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

Biological and Medical Ontologies: Human Phenotype Ontology (HPO).
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

Biological and Medical Ontologies: Disease Ontology (DO).
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data.
Bioinform., 2019

GenoSurf: metadata driven semantic search system for integrated genomic datasets.
Database J. Biol. Databases Curation, 2019

Exploiting Conceptual Modeling for Searching Genomic Metadata: A Quantitative and Qualitative Empirical Study.
Proceedings of the Advances in Conceptual Modeling, 2019

From a Conceptual Model to a Knowledge Graph for Genomic Datasets.
Proceedings of the Conceptual Modeling - 38th International Conference, 2019

Using GMQL-Web for Querying, Downloading and Integrating Public with Private Genomic Datasets.
Proceedings of the 10th ACM International Conference on Bioinformatics, 2019

2018
Ontology-driven metadata enrichment for genomic datasets.
Proceedings of the 11th International Conference Semantic Web Applications and Tools for Life Sciences, 2018

Using Metadata for Locating Genomic Datasets on a Global Scale.
Proceedings of the CIKM 2018 Workshops co-located with 27th ACM International Conference on Information and Knowledge Management (CIKM 2018), 2018

2017
From model checking to a temporal proof for partial models: preliminary example.
CoRR, 2017

From Model Checking to a Temporal Proof for Partial Models.
Proceedings of the Software Engineering and Formal Methods - 15th International Conference, 2017

Overview of GeCo: A Project for Exploring and Integrating Signals from the Genome.
Proceedings of the Data Analytics and Management in Data Intensive Domains, 2017

Conceptual Modeling for Genomics: Building an Integrated Repository of Open Data.
Proceedings of the Conceptual Modeling - 36th International Conference, 2017


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