Ann-Marie Mallon

According to our database, Ann-Marie Mallon authored at least 16 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

A framework for longitudinal latent factor modelling of treatment response in clinical trials with applications to Psoriatic Arthritis and Rheumatoid Arthritis.

Fabian Falck, Xuan Zhu, Sahra Ghalebikesabi, Matthias Kormaksson, Marc Vandemeulebroecke, Cong Zhang, Ruvie Martin, Stephen Gardiner, Chun Hei Kwok, Dominique M. West, Luis A. Santos, Chengeng Tian, Yu Pang, Aimee Readie, Gregory Ligozio, Kunal K. Gandhi, Thomas E. Nichols, Ann-Marie Mallon, Luke J. Kelly, David Ohlssen, George Nicholson

J. Biomed. Informatics, 2024

2023

The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease.

Tudor Groza, Federico López-Gómez, Hamed Haseli Mashhadi, Violeta Muñoz-Fuentes, Osman Nuri Günes, Robert J. Wilson, Pilar Cacheiro, Anthony Frost, Piia Keskivali-Bond, Bora Vardal, Aaron McCoy, Tsz Kwan Cheng, Luis A. Santos, Sara Wells, Damian Smedley, Ann-Marie Mallon, Helen E. Parkinson

Nucleic Acids Res., January, 2023

2022

Application of a convolutional neural network to the quality control of MRI defacing.

Daniel J. Delbarre, Luis A. Santos, Habib Ganjgahi, Neil R. Horner, Aaron McCoy, Henrik Westerberg, Dieter A. Häring, Thomas E. Nichols, Ann-Marie Mallon

Comput. Biol. Medicine, 2022

2020

Soft windowing application to improve analysis of high-throughput phenotyping data.

Hamed Haselimashhadi, Jeremy C. Mason, Violeta Muñoz-Fuentes, Federico López-Gómez, Kolawole O. Babalola, Elif F. Acar, Vivek Kumar, Jacqui White, Ann M. Flenniken, Ruairidh King, Ewan Straiton, John Richard Seavitt, Angelina Gaspero, Arturo Garza, Audrey E. Christianson, Chih-Wei Hsu, Corey L. Reynolds, Denise G. Lanza, Isabel Lorenzo, Jennie R. Green, Juan J. Gallegos, Ritu Bohat, Rodney C. Samaco, Surabi Veeraragavan, Jong Kyoung Kim, Gregor Miller, Helmut Fuchs, Lillian Garrett, Lore Becker, Yeon Kyung Kang, David Clary, Soo Young Cho, Masaru Tamura, Nobuhiko Tanaka, Kyung Dong Soo, Alexandr Bezginov, Ghina Bou About, Marie-France Champy, Laurent Vasseur, Sophie Leblanc, Hamid Meziane, Mohammed Selloum, Patrick T. Reilly, Nadine Spielmann, Holger Maier, Valérie Gailus-Durner, Tania Sorg, Hiroshi Masuya, Yuichi Obata, Jason D. Heaney, Mary E. Dickinson, Wolfgang Wurst, Glauco P. Tocchini-Valentini, Kevin C. Kent Lloyd, Colin McKerlie, Je Kyung Seong, Yann Herault, Martin Hrabé de Angelis, Steve D. M. Brown, Damian Smedley, Paul Flicek, Ann-Marie Mallon, Helen E. Parkinson, Terrence F. Meehan

Bioinform., 2020

2018

A bioimage informatics platform for high-throughput embryo phenotyping.

James M. Brown, Neil R. Horner, Thomas N. Lawson, Tanja Fiegel, Simon Greenaway, Hugh Morgan, Natalie Ring, Luis A. Santos, Duncan J. Sneddon, Lydia Teboul, Jennifer Vibert, Gagarine Yaikhom, Henrik Westerberg, Ann-Marie Mallon

Briefings Bioinform., 2018

2016

The digital revolution in phenotyping.

Anika Oellrich, Nigel Collier, Tudor Groza, Dietrich Rebholz-Schuhmann, Nigam Shah, Olivier Bodenreider, Mary Regina Boland, Ivo I. Georgiev, Hongfang Liu, Kevin M. Livingston, Augustin Luna, Ann-Marie Mallon, Prashanti Manda, Peter N. Robinson, Gabriella Rustici, Michelle Simon, Liqin Wang, Rainer Winnenburg, Michel Dumontier

Briefings Bioinform., 2016

2014

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.

Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen E. Parkinson

Nucleic Acids Res., 2014

2011

Anatomy ontologies and potential users: bridging the gap.

Ravensara S. Travillian, Tomasz Adamusiak, Tony Burdett, Michael Gruenberger, John M. Hancock, Ann-Marie Mallon, James Malone, Paul N. Schofield, Helen E. Parkinson

J. Biomed. Semant., 2011

2010

EMMA - mouse mutant resources for the international scientific community.

Phil Wilkinson, Jitka Sengerova, Raffaele Matteoni, Chao-Kung Chen, Gaetan Soulat, Abel Ureta-Vidal, Sabine Fessele, Michael Hagn, Marzia Massimi, Karen Pickford, Richard H. Butler, Susan Marschall, Ann-Marie Mallon, Amanda J. Pickard, Marcello Raspa, Ferdinando Scavizzi, Martin Fray, Vanessa Larrigaldie, Johan Leyritz, Ewan Birney, Glauco P. Tocchini-Valentini, Steve D. M. Brown, Yann Herault, Lluis Montoliu, Martin Hrabé de Angelis, Damian Smedley

Nucleic Acids Res., 2010

EuroPhenome: a repository for high-throughput mouse phenotyping data.

Hugh Morgan, Tim Beck, Andrew Blake, Hilary Gates, Niels C. Adams, Guillaume Debouzy, Sophie Leblanc, Christoph Lengger, Holger Maier, David G. Melvin, Hamid Meziane, Dave Richardson, Sara Wells, Jacqui White, Joe Wood, Martin Hrabé de Angelis, Steve D. M. Brown, John M. Hancock, Ann-Marie Mallon

Nucleic Acids Res., 2010

MouseBook: an integrated portal of mouse resources.

Andrew Blake, Karen Pickford, Simon Greenaway, Steve Thomas, Amanda J. Pickard, Christine M. Williamson, Niels C. Adams, Alison Walling, Tim Beck, Martin Fray, Jo Peters, Tom Weaver, Steve D. M. Brown, John M. Hancock, Ann-Marie Mallon

Nucleic Acids Res., 2010

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences.

Damian Smedley, Paul N. Schofield, Chao-Kung Chen, Vassilis Aidinis, Crysanthi Ainali, Jonathan B. L. Bard, Rudi Balling, Ewan Birney, Andrew Blake, Erik Bongcam-Rudloff, Anthony J. Brookes, Gianni Cesareni, Christina Chandras, Janan T. Eppig, Paul Flicek, Georgios V. Gkoutos, Simon Greenaway, Michael Gruenberger, Jean-Karim Hériché, Andrew Lyall, Ann-Marie Mallon, Dawn Muddyman, Florian Reisinger, Martin Ringwald, Nadia A. Rosenthal, Klaus Schughart, Morris A. Swertz, Gudmundur A. Thorisson, Michael Zouberakis, John M. Hancock

Database J. Biol. Databases Curation, 2010

2009

Practical application of ontologies to annotate and analyse large scale raw mouse phenotype data.

Tim Beck, Hugh Morgan, Andrew Blake, Sara Wells, John M. Hancock, Ann-Marie Mallon

BMC Bioinform., 2009

2008

EuroPhenome and EMPReSS: online mouse phenotyping resource.

Ann-Marie Mallon, Andrew Blake, John M. Hancock

Nucleic Acids Res., 2008

2005

CRAVE: a database, middleware and visualization system for phenotype ontologies.

Georgios V. Gkoutos, Eain C. J. Green, Simon Greenaway, Andrew Blake, Ann-Marie Mallon, John M. Hancock

Bioinform., 2005

2004

Building Mouse Phenotype Ontologies.

Georgios V. Gkoutos, Eain C. J. Green, Ann-Marie Mallon, John M. Hancock, Duncan Davidson

Proceedings of the Biocomputing 2004, 2004