Anil G. Jegga

According to our database, Anil G. Jegga authored at least 30 papers between 2005 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

MGATRx: Discovering Drug Repositioning Candidates Using Multi-View Graph Attention.

Jaswanth K. Yella, Anil G. Jegga

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

GraMDTA: Multimodal Graph Neural Networks for Predicting Drug-Target Associations.

Jaswanth K. Yella, Sudhir Ghandikota, Anil G. Jegga

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

Multimodal feature learning framework for disease biomarker discovery.

Sudhir Ghandikota, Jaswanth K. Yella, Anil G. Jegga

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19.

Sudhir Ghandikota, Mihika Sharma, Anil G. Jegga

Patterns, 2021

2020

Triangle-Based Tripartite Graph Clustering.

Yizong Cheng, Jaswanth K. Yella, Anil G. Jegga

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

A multi-context feature learning approach to identify disease-specific gene neighborhoods.

Sudhir Ghandikota, Anil G. Jegga

Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2014

ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context.

Chao Wu, Eric E. Bardes, Anil G. Jegga, Bruce J. Aronow

Nucleic Acids Res., 2014

2013

Mining FDA drug labels for medical conditions.

Qi Li, Louise Deléger, Todd Lingren, Haijun Zhai, Megan Kaiser, Laura Stoutenborough, Anil G. Jegga, Kevin Bretonnel Cohen, Imre Solti

BMC Medical Informatics Decis. Mak., 2013

Large-scale evaluation of automated clinical note de-identification and its impact on information extraction.

Louise Deléger, Katalin Molnár, Guergana Savova, Fei Xia, Todd Lingren, Qi Li, Keith Marsolo, Anil G. Jegga, Megan Kaiser, Laura Stoutenborough, Imre Solti

J. Am. Medical Informatics Assoc., 2013

Computational drug repositioning through heterogeneous network clustering.

Chao Wu, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga

BMC Syst. Biol., 2013

Integrative genomics identifies candidate microRNAs for pathogenesis of experimental biliary atresia.

Kazuhiko Bessho, Kumar Shanmukhappa, Rachel Sheridan, Pranavkumar Shivakumar, Reena Mourya, Stephanie Walters, Vivek Kaimal, Eric Dilbone, Anil G. Jegga, Jorge A. Bezerra

BMC Syst. Biol., 2013

A Biclustering Algorithm to Discover Functional Modules from ENCODE ChIP-Seq Data.

Chao Wu, Arjun Bakshi, Bruce J. Aronow, Anil G. Jegga, Raj Bhatnagar

Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

2012

A vertex similarity-based framework to discover and rank orphan disease-related genes.

Cheng Zhu, Akash Kushwaha, Kenneth Berman, Anil G. Jegga

BMC Syst. Biol., 2012

2011

Exploring Off-Targets and Off-Systems for Adverse Drug Reactions via Chemical-Protein Interactome - Clozapine-Induced Agranulocytosis as a Case Study.

Lun Yang, Kejian Wang, Jian Chen, Anil G. Jegga, Heng Luo, Leming Shi, Chunling Wan, Xizhi Guo, Shengying Qin, Guang He, Guoyin Feng, Lin He

PLoS Comput. Biol., 2011

Drug repositioning for orphan diseases.

Divya Sardana, Cheng Zhu, Minlu Zhang, Ranga Chandra Gudivada, Lun Yang, Anil G. Jegga

Briefings Bioinform., 2011

2010

A novel framework for detecting maximally banded matrices in binary data.

Faris Alqadah, Raj Bhatnagar, Anil G. Jegga

Stat. Anal. Data Min., 2010

PhenoHM: human-mouse comparative phenome-genome server.

Divya Sardana, Suresh Vasa, Nishanth Vepachedu, Jing Chen, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga

Nucleic Acids Res., 2010

ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems.

Vivek Kaimal, Eric E. Bardes, Scott C. Tabar, Anil G. Jegga, Bruce J. Aronow

Nucleic Acids Res., 2010

Mining Maximally Banded Matrices in Binary Data.

Faris Alqadah, Raj Bhatnagar, Anil G. Jegga

Proceedings of the SIAM International Conference on Data Mining, 2010

2009

ToppGene Suite for gene list enrichment analysis and candidate gene prioritization.

Jing Chen, Eric E. Bardes, Bruce J. Aronow, Anil G. Jegga

Nucleic Acids Res., 2009

Inferring novel disease indications for known drugs by semantically linking drug action and disease mechanism relationships.

Xiaoyan A. Qu, Ranga Chandra Gudivada, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow

BMC Bioinform., 2009

Regression based predictor for p53 transactivation.

Sivakumar Gowrisankar, Anil G. Jegga

BMC Bioinform., 2009

Correction: Disease candidate gene identification and prioritization using protein interaction networks.

Jing Chen, Bruce J. Aronow, Anil G. Jegga

BMC Bioinform., 2009

Disease candidate gene identification and prioritization using protein interaction networks.

Jing Chen, Bruce J. Aronow, Anil G. Jegga

BMC Bioinform., 2009

2008

Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledge.

Ranga Chandra Gudivada, Xiaoyan A. Qu, Jing Chen, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow

J. Biomed. Informatics, 2008

2007

PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease.

Anil G. Jegga, Sivakumar Gowrisankar, Jing Chen, Bruce J. Aronow

Nucleic Acids Res., 2007

GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs.

Anil G. Jegga, Jing Chen, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Ranga Chandra Gudivada, Sue Kong, Vivek Kaimal, Bruce J. Aronow

Nucleic Acids Res., 2007

Improved human disease candidate gene prioritization using mouse phenotype.

Jing Chen, Huan Xu, Bruce J. Aronow, Anil G. Jegga

BMC Bioinform., 2007

Identifying Functional Binding Motifs of Tumor Protein p53 Using Support Vector Machines.

Amit U. Sinha, Mukta Phatak, Raj Bhatnagar, Anil G. Jegga

Proceedings of the Sixth International Conference on Machine Learning and Applications, 2007

2005

CisMols Analyzer: identification of compositionally similar <i>cis</i>-element clusters in ortholog conserved regions of coordinately expressed genes.

Anil G. Jegga, Ashima Gupta, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Steven Connolly, Kevin Finley, Bruce J. Aronow

Nucleic Acids Res., 2005