Andrey D. Prjibelski

According to our database, Andrey D. Prjibelski authored at least 12 papers between 2012 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

Extending rnaSPAdes functionality for hybrid transcriptome assembly.

Andrey D. Prjibelski, Giuseppe D. Puglia, Dmitry Antipov, Elena Bushmanova, Daniela Giordano, Alla Mikheenko, Domenico Vitale, Alla L. Lapidus

BMC Bioinform., 2020

2019

Sequence Analysis.

Andrey D. Prjibelski, Anton I. Korobeynikov, Alla L. Lapidus

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

SGTK: a toolkit for visualization and assessment of scaffold graphs.

Olga Kunyavskaya, Andrey D. Prjibelski

Bioinform., 2019

De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments.

Bahar Behsaz, Hosein Mohimani, Alexey A. Gurevich, Andrey D. Prjibelski, Mark F. Fisher, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology, 2019

2018

Versatile genome assembly evaluation with QUAST-LG.

Alla Mikheenko, Andrey D. Prjibelski, Vladislav Saveliev, Dmitry Antipov, Alexey A. Gurevich

Bioinform., 2018

2016

Icarus: visualizer for <i>de novo</i> assembly evaluation.

Alla Mikheenko, Gleb Valin, Andrey D. Prjibelski, Vladislav Saveliev, Alexey A. Gurevich

Bioinform., 2016

rnaQUAST: a quality assessment tool for <i>de novo</i> transcriptome assemblies.

Elena Bushmanova, Dmitry Antipov, Alla L. Lapidus, Vladimir Suvorov, Andrey D. Prjibelski

Bioinform., 2016

2015

Assembling short reads from jumping libraries with large insert sizes.

Irina Vasilinetc, Andrey D. Prjibelski, Alexey A. Gurevich, Anton I. Korobeynikov, Pavel A. Pevzner

Bioinform., 2015

2014

ExSPAnder: a universal repeat resolver for DNA fragment assembly.

Andrey D. Prjibelski, Irina Vasilinetc, Anton Bankevich, Alexey A. Gurevich, Tatiana Krivosheeva, Sergey Nurk, Son K. Pham, Anton I. Korobeynikov, Alla L. Lapidus, Pavel A. Pevzner

Bioinform., 2014

2013

Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products.

Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Scott R. Clingenpeel, Tanja Woyke, Jeffrey S. McLean, Roger Lasken, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner

J. Comput. Biol., 2013

Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads.

Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelsky, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Jeffrey S. McLean, Roger Lasken, Scott R. Clingenpeel, Tanja Woyke, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner

Proceedings of the Research in Computational Molecular Biology, 2013

2012

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing.

Anton Bankevich, Sergey Nurk, Dmitry Antipov, Alexey A. Gurevich, Mikhail Dvorkin, Alexander S. Kulikov, Valery M. Lesin, Sergey I. Nikolenko, Son K. Pham, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Nikolay Vyahhi, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner

J. Comput. Biol., 2012