Andrei Paun

According to our database, Andrei Paun authored at least 94 papers between 1997 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Special issue on Foundational Methods in Systems Biology.

Ion Petre, Andrei Paun

Theor. Comput. Sci., 2024

Jump complexity of finite automata with translucent letters.

Victor Mitrana, Andrei Paun, Mihaela Paun, José-Ramón Sánchez-Couso

Theor. Comput. Sci., 2024

2022

Accepting multiple splicing systems.

José-Ramón Sánchez-Couso, Fernando Arroyo, Victor Mitrana, Andrei Paun, Mihaela Paun

J. King Saud Univ. Comput. Inf. Sci., 2022

P systems with protein rules.

Yara Hamshawi, Florin-Daniel Bîlbîe, Andrei Paun, Assaf Malka, Ron Piran

J. Frankl. Inst., 2022

Network analytics for drug repurposing in COVID-19.

Nicoleta Siminea, Victor-Bogdan Popescu, José Ángel Sánchez Martín, Daniela Florea, Georgiana Gavril, Ana Maria Gheorghe, Corina Itcus, Krishna Kanhaiya, Octavian Pacioglu, Laura Ioana Popa, Romica Trandafir, Maria Iris Tusa, Manuela Sidoroff, Mihaela Paun, Eugen Czeizler, Andrei Paun, Ion Petre

Briefings Bioinform., 2022

2021

Small SNQ P Systems with multiple types of spikes.

Florin-Daniel Bîlbîe, Andrei Paun

Theor. Comput. Sci., 2021

Hairpin completions and reductions: semilinearity properties.

Henning Bordihn, Victor Mitrana, Andrei Paun, Mihaela Paun

Nat. Comput., 2021

Non-preserving Accepting Splicing Systems.

Victor Mitrana, Andrei Paun, Mihaela Paun, José Ángel Sánchez Martín

J. Autom. Lang. Comb., 2021

2020

On the group memory complexity of extended finite automata over groups.

Fernando Arroyo, Victor Mitrana, Andrei Paun, Mihaela Paun, José-Ramón Sánchez-Couso

J. Log. Algebraic Methods Program., 2020

Universality of SNQ P Systems Using One Type of Spikes and Restrictive Rule Application.

Andrei Paun, Florin-Daniel Bîlbîe

Int. J. Found. Comput. Sci., 2020

2019

Further Properties of Self-assembly by Hairpin Formation.

Henning Bordihn, Victor Mitrana, Andrei Paun, Mihaela Paun

Proceedings of the Unconventional Computation and Natural Computation, 2019

A Multi-agent Model for Cell Population.

Fernando Arroyo, Victor Mitrana, Andrei Paun, Mihaela Paun

Proceedings of the Agents and Multi-agent Systems: Technologies and Applications 2019, 2019

How Complex is to Solve a Hard Problem with Accepting Splicing Systems.

Victor Mitrana, Andrei Paun, Mihaela Paun

Proceedings of the 4th International Conference on Complexity, 2019

2018

Spiking Neural P Systems With Polarizations.

Tingfang Wu, Andrei Paun, Zhiqiang Zhang, Linqiang Pan

IEEE Trans. Neural Networks Learn. Syst., 2018

Small networks of polarized splicing processors are universal.

Henning Bordihn, Victor Mitrana, Maria C. Negru, Andrei Paun, Mihaela Paun

Nat. Comput., 2018

One Dimensional DNA Tiles Self Assembly Model Simulation.

Alexandru Amarioarei, Gefry Barad, Elena Czeizler, Eugen Czeizler, Ana-Maria Dobre, Corina Itcus, Andrei Paun, Mihaela Paun, Romica Trandafir, Iris Tusa

Int. J. Unconv. Comput., 2018

Simplified and Yet Turing Universal Spiking Neural P Systems with Communication on Request.

Tingfang Wu, Florin-Daniel Bîlbîe, Andrei Paun, Linqiang Pan, Ferrante Neri

Int. J. Neural Syst., 2018

Universal enzymatic numerical P systems with small number of enzymatic variables.

Zhiqiang Zhang, Tingfang Wu, Andrei Paun, Linqiang Pan

Sci. China Inf. Sci., 2018

DNA-Guided Assembly of Nanocellulose Meshes.

Alexandru Amarioarei, Gefry Barad, Eugen Czeizler, Ana-Maria Dobre, Corina Itcus, Victor Mitrana, Andrei Paun, Mihaela Paun, Frankie Spencer, Romica Trandafir, Iris Tusa

Proceedings of the Theory and Practice of Natural Computing - 7th International Conference, 2018

A Look at the Descriptional Complexity of SNQ P Systems.

Andrei Paun, Florin-Daniel Bîlbîe

Proceedings of the Enjoying Natural Computing, 2018

2017

Improvements on contours based segmentation for DNA microarray image processing.

Yang Li, Andrei Paun, Mihaela Paun

Theor. Comput. Sci., 2017

On trace languages generated by (small) spiking neural P systems.

Haiming Chen, Mihai Ionescu, Andrei Paun, Gheorghe Paun

Theor. Comput. Sci., 2017

Spiking Neural P Systems with Rules on Synapses Working in Sum Spikes Consumption Strategy.

Yansen Su, Tingfang Wu, Fei Xu, Andrei Paun

Fundam. Informaticae, 2017

P Systems Simulating Bacterial Conjugation: Universality and Properties.

Andrei Paun, Alfonso Rodríguez-Patón

Fundam. Informaticae, 2017

Networks of Polarized Splicing Processors.

Henning Bordihn, Victor Mitrana, Andrei Paun, Mihaela Paun

Proceedings of the Theory and Practice of Natural Computing - 6th International Conference, 2017

2016

Numerical P systems with migrating variables.

Zhiqiang Zhang, Tingfang Wu, Andrei Paun, Linqiang Pan

Theor. Comput. Sci., 2016

A failure index for HPC applications.

Andrei Paun, Clayton Chandler, Chokchai Leangsuksun, Mihaela Paun

J. Parallel Distributed Comput., 2016

2015

On the Universality of Axon P Systems.

Xingyi Zhang, Linqiang Pan, Andrei Paun

IEEE Trans. Neural Networks Learn. Syst., 2015

Segmenting microarray images using a contour-based method.

Mihaela Paun, Yang Li, Yuan Cheng, Iris Tusa, Andrei Paun

Theor. Comput. Sci., 2015

2014

Three Universal Homogeneous Spiking Neural P Systems Using Max Spike.

Andrei Paun, Petr Sosík

Fundam. Informaticae, 2014

2013

P systems with proteins on membranes characterize PSPACE.

Petr Sosík, Andrei Paun, Alfonso Rodríguez-Patón

Theor. Comput. Sci., 2013

2012

A Case-Study on the Influence of Noise to Log-Gain Principles for Flux Dynamic Discovery.

Tanvir Ahmed, Garrett DeLancy, Andrei Paun

Proceedings of the Membrane Computing, 2012

2011

A review of the nondeterministic waiting time algorithm.

John Jack, Andrei Paun, Alfonso Rodríguez-Patón

Nat. Comput., 2011

P Systems with proteins on Membranes: a Survey.

Andrei Paun, Mihaela Paun, Alfonso Rodríguez-Patón, Manuela Sidoroff

Int. J. Found. Comput. Sci., 2011

Sequentiality Induced by Spike Number in SNP Systems: Small Universal Machines.

Andrei Paun, Manuela Sidoroff

Proceedings of the Membrane Computing, 2011

Poster: Biochemical signaling: A discrete simulation with memory enhancement.

Andrei Paun, Mihaela Paun, Alfonso Rodríguez-Patón, John Jack

Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011

2009

Discrete Modeling of Biochemical Signaling with Memory Enhancement.

John Jack, Andrei Paun

Trans. Comp. Sys. Biology, 2009

On the Hopcroft's minimization technique for DFA and DFCA.

Andrei Paun, Mihaela Paun, Alfonso Rodríguez-Patón

Theor. Comput. Sci., 2009

Sequential SNP systems based on min/max spike number.

Oscar H. Ibarra, Andrei Paun, Alfonso Rodríguez-Patón

Theor. Comput. Sci., 2009

The Nondeterministic Waiting Time Algorithm: A Review

John Jack, Andrei Paun

Proceedings of the Proceedings Eleventh International Workshop on Descriptional Complexity of Formal Systems, 2009

On the Power of Computing with Proteins on Membranes.

Petr Sosík, Andrei Paun, Alfonso Rodríguez-Patón, David Pérez

Proceedings of the Membrane Computing, 10th International Workshop, 2009

2008

Computing with cells: membrane systems - some complexity issues.

Oscar H. Ibarra, Andrei Paun

Int. J. Parallel Emergent Distributed Syst., 2008

On spiking neural P systems and partially blind counter machines.

Oscar H. Ibarra, Sara Woodworth, Fang Yu, Andrei Paun

Nat. Comput., 2008

Spiking neural P systems with extended rules: universality and languages.

Haiming Chen, Mihai Ionescu, Tseren-Onolt Ishdorj, Andrei Paun, Gheorghe Paun, Mario J. Pérez-Jiménez

Nat. Comput., 2008

Discrete Nondeterministic Modeling of the Fas Pathway.

John Jack, Alfonso Rodríguez-Patón, Oscar H. Ibarra, Andrei Paun

Int. J. Found. Comput. Sci., 2008

Hopcroft's Minimization Technique: Queues or Stacks?.

Andrei Paun, Mihaela Paun, Alfonso Rodríguez-Patón

Proceedings of the Implementation and Applications of Automata, 2008

Effects of HIV-1 Proteins on the Fas-Mediated Apoptotic Signaling Cascade: A Computational Study of Latent CD4+ T Cell Activation.

John Jack, Andrei Paun, Alfonso Rodríguez-Patón

Proceedings of the Membrane Computing - 9th International Workshop, 2008

Sequentiality Induced by Spike Number in SNP Systems.

Oscar H. Ibarra, Andrei Paun, Alfonso Rodríguez-Patón

Proceedings of the DNA Computing, 14th International Meeting on DNA Computing, 2008

2007

Membrane Systems.

Andrei Paun, Oscar H. Ibarra

Proceedings of the Handbook of Parallel Computing - Models, Algorithms and Applications., 2007

Normal forms for spiking neural P systems.

Oscar H. Ibarra, Andrei Paun, Gheorghe Paun, Alfonso Rodríguez-Patón, Petr Sosík, Sara Woodworth

Theor. Comput. Sci., 2007

On the Hopcroft's minimization algorithm

Andrei Paun

CoRR, 2007

Small universal spiking neural P systems.

Andrei Paun, Gheorghe Paun

Biosyst., 2007

On Flip-Flop Membrane Systems with Proteins.

Andrei Paun, Alfonso Rodríguez-Patón

Proceedings of the Membrane Computing, 8th International Workshop, 2007

2006

Incremental construction of minimal deterministic finite cover automata.

Cezar Câmpeanu, Andrei Paun, Jason R. Smith

Theor. Comput. Sci., 2006

P Systems with Proteins on Membranes.

Andrei Paun, Bianca Popa

Fundam. Informaticae, 2006

Modeling Signal Transduction Using P Systems.

Andrei Paun, Mario J. Pérez-Jiménez, Francisco José Romero-Campero

Proceedings of the Membrane Computing, 7th International Workshop, 2006

P Systems with Symport/Antiport and Time.

Hitesh Nagda, Andrei Paun, Alfonso Rodríguez-Patón

Proceedings of the Membrane Computing, 7th International Workshop, 2006

Computing with Spiking Neural P Systems: Traces and Small Universal Systems.

Mihai Ionescu, Andrei Paun, Gheorghe Paun, Mario J. Pérez-Jiménez

Proceedings of the DNA Computing, 12th International Meeting on DNA Computing, 2006

P Systems with Proteins on Membranes and Membrane Division.

Andrei Paun, Bianca Popa

Proceedings of the Developments in Language Theory, 10th International Conference, 2006

On Trace Languages Generated by (Small) Spiking Neural P Systems.

Haiming Chen, Mihai Ionescu, Andrei Paun, Gheorghe Paun, Bianca Popa

Proceedings of the 8th International Workshop on Descriptional Complexity of Formal Systems - DCFS 2006, Las Cruces, New Mexico, USA, June 21, 2006

Tight Bounds for the State Complexity of Deterministic Cover Automata.

Cezar Câmpeanu, Andrei Paun, Jason R. Smith

Proceedings of the 8th International Workshop on Descriptional Complexity of Formal Systems - DCFS 2006, Las Cruces, New Mexico, USA, June 21, 2006

2005

P systems with active membranes and without polarizations.

Rudolf Freund, Andrei Paun

Soft Comput., 2005

Optimal results for the computational completeness of gemmating (tissue) P systems.

Rudolf Freund, Marion Oswald, Andrei Paun

Int. J. Found. Comput. Sci., 2005

Results on Transforming NFA into DFCA.

Cezar Câmpeanu, Lila Kari, Andrei Paun

Fundam. Informaticae, 2005

An Incremental Algorithm for Constructing Minimal Deterministic Finite Cover Automata.

Cezar Câmpeanu, Andrei Paun, Jason R. Smith

Proceedings of the Implementation and Application of Automata, 2005

Counting Time in Computing with Cells.

Oscar H. Ibarra, Andrei Paun

Proceedings of the DNA Computing, 11th International Workshop on DNA Computing, 2005

2004

Results on Catalytic and Evolution-Communication P Systems.

Shankara Narayanan Krishna, Andrei Paun

New Gener. Comput., 2004

Tight Bounds for NFA to DFCA Transformations for Binary Alphabets.

Cezar Câmpeanu, Andrei Paun

Proceedings of the Implementation and Application of Automata, 2004

P Systems Generating Trees.

Rudolf Freund, Marion Oswald, Andrei Paun

Proceedings of the Membrane Computing, 5th International Workshop, 2004

Computing Beyond the Turing Limit Using the H Systems.

Cezar Câmpeanu, Andrei Paun

Proceedings of the DNA Computing, 10th International Workshop on DNA Computing, 2004

Gemmating P Systems are Computationally Complete with Four Membranes.

Rudolf Freund, Marion Oswald, Andrei Paun

Proceedings of the 6th International Workshop on Descriptional Complexity of Formal Systems - DCFS 2004, London, Ontario, Canada, July 26, 2004

Lower bounds for NFA to DCFA Transformations.

Cezar Câmpeanu, Andrei Paun

Proceedings of the 6th International Workshop on Descriptional Complexity of Formal Systems - DCFS 2004, London, Ontario, Canada, July 26, 2004

On the Universality of P Systems with Minimal Symport/Antiport Rules.

Lila Kari, Carlos Martín-Vide, Andrei Paun

Proceedings of the Aspects of Molecular Computing, 2004

2003

Unexpected universality results for three classes of P systems with symport/antiport.

Mihai Ionescu, Carlos Martín-Vide, Andrei Paun, Gheorghe Paun

Nat. Comput., 2003

Counting The Number Of Minimal Dfca Obtained By Merging States.

Cezar Câmpeanu, Andrei Paun

Int. J. Found. Comput. Sci., 2003

Universality of Minimal Symport/Antiport: Five Membranes Suffice.

Francesco Bernardini, Andrei Paun

Proceedings of the Membrane Computing, International Workshop, 2003

2002

The Power of Communication: P Systems with Symport/Antiport.

Andrei Paun, Gheorghe Paun

New Gener. Comput., 2002

P Systems with Global Rules.

Andrei Paun

Theory Comput. Syst., 2002

On the Power of P Systems with Symport Rules.

Carlos Martín-Vide, Andrei Paun, Gheorghe Paun

J. Univers. Comput. Sci., 2002

Computing by Communication in Networks of Membranes.

Andrei Paun, Gheorghe Paun, Grzegorz Rozenberg

Int. J. Found. Comput. Sci., 2002

An Efficient Algorithm for Constructing Minimal Cover Automata for Finite Languages.

Cezar Câmpeanu, Andrei Paun, Sheng Yu

Int. J. Found. Comput. Sci., 2002

ReMembrane Systems with Coupled Transport: Universality and Normal Forms.

Carlos Martín-Vide, Andrei Paun, Gheorghe Paun, Grzegorz Rozenberg

Fundam. Informaticae, 2002

Membrane Computing: New Results, New Problems.

Carlos Martín-Vide, Andrei Paun, Gheorghe Paun

Bull. EATCS, 2002

Membrane Systems with Symport/Antiport Rules: Universality Results.

Rudolf Freund, Andrei Paun

Proceedings of the Membrane Computing, International Workshop, 2002

The Number of Similarity Relations and the Number of Minimal Deterministic Finite Cover Automata.

Cezar Câmpeanu, Andrei Paun

Proceedings of the Implementation and Application of Automata, 2002

2001

Further Remarks on P Systems with Symport Rules.

Andrei Paun, Gheorghe Paun, Alfonso Rodríguez-Patón

Sci. Ann. Cuza Univ., 2001

On membrane computing based on splicing.

Andrei Paun, Mihaela Paun

Proceedings of the Where Mathematics, 2001

String Operations Suggested by DNA Biochemistry: The Balanced Cut Operation.

Lila Kari, Andrei Paun

Proceedings of the Words, Semigroups, and Transductions, 2001

2000

On the Diameter of Various Classes of H Systems.

Andrei Paun

J. Autom. Lang. Comb., 2000

An O(n²) Algorithm for Constructing Minimal Cover Automata for Finite Languages.

Andrei Paun, Nicolae Santean, Sheng Yu

Proceedings of the Implementation and Application of Automata, 2000

On P Systems with Active Membranes.

Andrei Paun

Proceedings of the Unconventional Models of Computation, 2000

1999

On Time-Varying H Systems.

Andrei Paun

Bull. EATCS, 1999

State and Transition Complexity of Watson-Crick Finite Automata.

Andrei Paun, Mihaela Paun

Proceedings of the Fundamentals of Computation Theory, 12th International Symposium, 1999

1997

Controlled H Systems of Small Radius.

Andrei Paun

Fundam. Informaticae, 1997