Andrei L. Lomize

According to our database, Andrei L. Lomize authored at least 12 papers between 1999 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2023

Structural Modeling of Cytokine-Receptor-JAK2 Signaling Complexes Using AlphaFold Multimer.

Irina D. Pogozheva, Stanislav Cherepanov, Sang-Jun Park, Malini Raghavan, Wonpil Im, Andrei L. Lomize

J. Chem. Inf. Model., September, 2023

2022

Comparative Molecular Dynamics Simulation Studies of Realistic Eukaryotic, Prokaryotic, and Archaeal Membranes.

Irina D. Pogozheva, Grant A. Armstrong, Lingyang Kong, Timothy J. Hartnagel, Carly A. Carpino, Stephen E. Gee, Danielle M. Picarello, Amanda S. Rubin, Jumin Lee, Soohyung Park, Andrei L. Lomize, Wonpil Im

J. Chem. Inf. Model., 2022

2021

Thermodynamics-Based Molecular Modeling of α-Helices in Membranes and Micelles.

Andrei L. Lomize, Kevin Schnitzer, Spencer C. Todd, Irina D. Pogozheva

J. Chem. Inf. Model., 2021

2019

Physics-Based Method for Modeling Passive Membrane Permeability and Translocation Pathways of Bioactive Molecules.

Andrei L. Lomize, Irina D. Pogozheva

J. Chem. Inf. Model., 2019

PerMM: A Web Tool and Database for Analysis of Passive Membrane Permeability and Translocation Pathways of Bioactive Molecules.

Andrei L. Lomize, Jacob M. Hage, Kevin Schnitzer, Konstantin Golobokov, Mitchell B. Lafaive, Alexander C. Forsyth, Irina D. Pogozheva

J. Chem. Inf. Model., 2019

2018

Membranome 2.0: database for proteome-wide profiling of bitopic proteins and their dimers.

Andrei L. Lomize, Jacob M. Hage, Irina D. Pogozheva

Bioinform., 2018

2017

Membranome: a database for proteome-wide analysis of single-pass membrane proteins.

Andrei L. Lomize, Mikhail A. Lomize, Shean R. Krolicki, Irina D. Pogozheva

Nucleic Acids Res., 2017

2012

OPM database and PPM web server: resources for positioning of proteins in membranes.

Mikhail A. Lomize, Irina D. Pogozheva, Hyeon Joo, Henry I. Mosberg, Andrei L. Lomize

Nucleic Acids Res., 2012

2011

Anisotropic Solvent Model of the Lipid Bilayer. 2. Energetics of Insertion of Small Molecules, Peptides, and Proteins in Membranes.

Andrei L. Lomize, Irina D. Pogozheva, Henry I. Mosberg

J. Chem. Inf. Model., 2011

Anisotropic Solvent Model of the Lipid Bilayer. 1. Parameterization of Long-Range Electrostatics and First Solvation Shell Effects.

Andrei L. Lomize, Irina D. Pogozheva, Henry I. Mosberg

J. Chem. Inf. Model., 2011

2006

OPM: Orientations of Proteins in Membranes database.

Mikhail A. Lomize, Andrei L. Lomize, Irina D. Pogozheva, Henry I. Mosberg

Bioinform., 2006

1999

Structural organization of G-protein-coupled receptors.

Andrei L. Lomize, Irina D. Pogozheva, Henry I. Mosberg

J. Comput. Aided Mol. Des., 1999