Andreas Sjödin

According to our database, Andreas Sjödin authored at least 9 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Nanometa Live: a user-friendly application for real-time metagenomic data analysis and pathogen identification.

Kristofer Sandås, Jacob Lewerentz, Edvin Karlsson, Linda Karlsson, David Sundell, Kotryna Simonyté-Sjödin, Andreas Sjödin

Bioinform., March, 2024

sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets.

Luiz Irber, N. Tessa Pierce-Ward, Mohamed Abuelanin, Harriet Alexander, Abhishek Anant, Keya Barve, Colton Baumler, Olga B. Botvinnik, Phillip Brooks, Daniel Dsouza, Gautier Laurent, Mahmudur Rahman Hera, Hannah Eve Houts, Lisa K. Johnson, Fabian Klötzl, David Koslicki, Marisa Lim, Ricky Lim, Bradley Nelson, Ivan Ogasawara, Taylor Reiter, Camille Scott, Andreas Sjödin, Daniel S. Standage, S. Joshua Swamidass, Connor Tiffany, Pranathi Vemuri, Erik Young, C. Titus Brown

J. Open Source Softw., 2024

2021

FlexTaxD: flexible modification of taxonomy databases for improved sequence classification.

David Sundell, Caroline Öhrman, Daniel Svensson, Edvin Karlsson, Björn Brindefalk, Kerstin Myrtennäs, Jon Ahlinder, Markus H. Antwerpen, Mathias C. Walter, Mats Forsman, Per Stenberg, Andreas Sjödin

Bioinform., 2021

2019

doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows.

Daniel Svensson, Rickard Sjögren, David Sundell, Andreas Sjödin, Johan Trygg

BMC Bioinform., 2019

2014

CanSNPer: a hierarchical genotype classifier of clonal pathogens.

Adrian Lärkeryd, Kerstin Myrtennäs, Edvin Karlsson, Chinmay Kumar Dwibedi, Mats Forsman, Pär Larsson, Anders Johansson, Andreas Sjödin

Bioinform., 2014

2012

The SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis.

Jing-Woei Li, Keith Robison, Marcel Martin, Andreas Sjödin, Björn Usadel, Matthew Young, Eric C. Olivares, Dan M. Bolser

Nucleic Acids Res., 2012

2007

Orthogonal projections to latent structures as a strategy for microarray data normalization.

Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Stefan Jansson, Thomas Moritz, Johan Trygg

BMC Bioinform., 2007

2006

MASQOT-GUI: spot quality assessment for the two-channel microarray platform.

Max Bylesjö, Andreas Sjödin, Daniel Eriksson, Henrik Antti, Thomas Moritz, Stefan Jansson, Johan Trygg

Bioinform., 2006

2005

MASQOT: a method for cDNA microarray spot quality control.

Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Michael Sjöström, Stefan Jansson, Henrik Antti, Johan Trygg

BMC Bioinform., 2005