Andreas Heger

According to our database, Andreas Heger authored at least 16 papers between 2000 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

CGAT-core: a python framework for building scalable, reproducible computational biology workflows.

Adam P. Cribbs, Sebastian Luna-Valero, Charlotte George, Ian M. Sudbery, Antonio J. Berlanga-Taylor, Stephen N. Sansom, Tom Smith, Nicholas E. Ilott, Jethro S. Johnson, Jakub Scaber, Katherine Brown, David Sims, Andreas Heger

F1000Research, 2019

2014

Pfam: the protein families database.

Robert D. Finn, Alex Bateman, Jody Clements, Penelope Coggill, Ruth Y. Eberhardt, Sean R. Eddy, Andreas Heger, Kirstie Hetherington, Liisa Holm, Jaina Mistry, Erik L. L. Sonnhammer, John G. Tate, Marco Punta

Nucleic Acids Res., 2014

CGAT: computational genomics analysis toolkit.

David Sims, Nicholas E. Ilott, Stephen N. Sansom, Ian M. Sudbery, Jethro S. Johnson, Katherine A. Fawcett, Antonio J. Berlanga-Taylor, Sebastian Luna-Valero, Chris P. Ponting, Andreas Heger

Bioinform., 2014

2013

GAT: a simulation framework for testing the association of genomic intervals.

Andreas Heger, Caleb Webber, Martin Goodson, Chris P. Ponting, Gerton Lunter

Bioinform., 2013

2012

The Pfam protein families database.

Marco Punta, Penny C. Coggill, Ruth Y. Eberhardt, Jaina Mistry, John G. Tate, Chris Boursnell, Ningze Pang, Kristoffer Forslund, Goran Ceric, Jody Clements, Andreas Heger, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman, Robert D. Finn

Nucleic Acids Res., 2012

2010

The Pfam protein families database.

Robert D. Finn, Jaina Mistry, John G. Tate, Penny C. Coggill, Andreas Heger, Joanne E. Pollington, O. Luke Gavin, Prasad Gunasekaran, Goran Ceric, Kristoffer Forslund, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman

Nucleic Acids Res., 2010

2008

OPTIC: orthologous and paralogous transcripts in clades.

Andreas Heger, Chris P. Ponting

Nucleic Acids Res., 2008

PairsDB atlas of protein sequence space.

Andreas Heger, Eija Korpelainen, Taavi Hupponen, Kimmo Mattila, Vesa Ollikainen, Liisa Holm

Nucleic Acids Res., 2008

2007

The global trace graph, a novel paradigm for searching protein sequence databases.

Andreas Heger, Swapan Mallick, Christopher Andrew Wilton, Liisa Holm

Bioinform., 2007

2005

ADDA: a domain database with global coverage of the protein universe.

Andreas Heger, Christopher Andrew Wilton, Ashwin Sivakumar, Liisa Holm

Nucleic Acids Res., 2005

2004

Accurate Detection of Very Sparse Sequence Motifs.

Andreas Heger, Michael Lappe, Liisa Holm

J. Comput. Biol., 2004

2003

Sensitive pattern discovery with 'fuzzy' alignments of distantly related proteins.

Andreas Heger, Liisa Holm

Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003

2001

A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3.

Sabine Dietmann, Jong-Chan Park, Cédric Notredame, Andreas Heger, Michael Lappe, Liisa Holm

Nucleic Acids Res., 2001

Picasso: generating a covering set of protein family profiles.

Andreas Heger, Liisa Holm

Bioinform., 2001

2000

RSDB: representative protein sequence databases have high information content.

Jong-Chan Park, Liisa Holm, Andreas Heger, Cyrus Chothia

Bioinform., 2000

Estimating the significance of sequence order in protein secondary structure and prediction.

Jong-Chan Park, Sabine Dietmann, Andreas Heger, Liisa Holm

Bioinform., 2000