Anastasia Krithara

According to our database, Anastasia Krithara authored at least 65 papers between 2008 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

BioASQ Synergy: a dialogue between question-answering systems and biomedical experts for promoting COVID-19 research.

Anastasia Krithara, Anastasios Nentidis, Eirini Vandorou, Georgios Katsimpras, Yannis Almirantis, Magda Arnal, Adomas Bunevicius, Eulàlia Farré-Maduell, Maya Kassiss, Vasileios Konstantakos, Sherri Matis-Mitchell, Dimitris Polychronopoulos, Jesus Rodriguez-Pascual, Eleftherios Samaras, Martina Samiotaki, Despina Sanoudou, Aspasia Vozi, Georgios Paliouras

J. Am. Medical Informatics Assoc., 2024

BioASQ at CLEF2024: The Twelfth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge.

Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Martin Krallinger, Luis Gascó Sánchez, Salvador Lima-López, Eulàlia Farré, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina

Proceedings of the Advances in Information Retrieval, 2024

Zero-Shot Relabeling of Weak Labels for Fine-Grained Semantic Indexing of Biomedical Literature.

Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

Proceedings of the ECAI 2024 - 27th European Conference on Artificial Intelligence, 19-24 October 2024, Santiago de Compostela, Spain, 2024

Overview of BioASQ Tasks 12b and Synergy12 in CLEF2024.

Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras

Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2024), 2024

Overview of BioASQ 2024: The Twelfth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.

Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Martin Krallinger, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina, Georgios Paliouras

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2024

Overview of MultiCardioNER task at BioASQ 2024 on Medical Specialty and Language Adaptation of Clinical NER Systems for Spanish, English and Italian.

Salvador Lima-López, Eulàlia Farré-Maduell, Jan Rodríguez-Miret, Miguel Rodríguez-Ortega, Livia Lilli, Jacopo Lenkowicz, Giovanna Ceroni, Jonathan Kossof, Anoop Shah, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger

Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2024), 2024

2023

Large-scale investigation of weakly-supervised deep learning for the fine-grained semantic indexing of biomedical literature.

Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

J. Biomed. Informatics, October, 2023

Knowledge4COVID-19: A semantic-based approach for constructing a COVID-19 related knowledge graph from various sources and analyzing treatments' toxicities.

Ahmad Sakor, Samaneh Jozashoori, Emetis Niazmand, Ariam Rivas, Konstantinos Bougiatiotis, Fotis Aisopos, Enrique Iglesias, Philipp D. Rohde, Trupti Padiya, Anastasia Krithara, Georgios Paliouras, Maria-Esther Vidal

J. Web Semant., 2023

The road from manual to automatic semantic indexing of biomedical literature: a 10 years journey.

Anastasia Krithara, James G. Mork, Anastasios Nentidis, Georgios Paliouras

Frontiers Res. Metrics Anal., 2023

Large-scale fine-grained semantic indexing of biomedical literature based on weakly-supervised deep learning.

Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

CoRR, 2023

BioASQ at CLEF2023: The Eleventh Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge.

Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Eulàlia Farré-Maduell, Salvador Lima-López, Martin Krallinger

Proceedings of the Advances in Information Retrieval, 2023

Overview of BioASQ Tasks 11b and Synergy11 in CLEF2023.

Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras

Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023

Overview of BioASQ 2023: The Eleventh BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.

Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2023

Overview of MedProcNER Task on Medical Procedure Detection and Entity Linking at BioASQ 2023.

Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger

Proceedings of the Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), 2023

2022

CRISPRedict: a CRISPR-Cas9 web tool for interpretable efficiency predictions.

Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras

Nucleic Acids Res., 2022

Knowledge4COVID-19: A Semantic-based Approach for Constructing a COVID-19 related Knowledge Graph from Various Sources and Analysing Treatments' Toxicities.

Ahmad Sakor, Samaneh Jozashoori, Emetis Niazmand, Ariam Rivas, Konstantinos Bougiatiotis, Fotis Aisopos, Enrique Iglesias, Philipp D. Rohde, Trupti Padiya, Anastasia Krithara, Georgios Paliouras, Maria-Esther Vidal

CoRR, 2022

Modeling the off-target effects of CRISPR-Cas9 experiments for the treatment of Duchenne Muscular Dystrophy.

Eleni Koutsoni, Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras

Proceedings of the SETN 2022: 12th Hellenic Conference on Artificial Intelligence, Corfu, Greece, September 7, 2022

BioASQ at CLEF2022: The Tenth Edition of the Large-scale Biomedical Semantic Indexing and Question Answering Challenge.

Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Luis Gascó, Martin Krallinger

Proceedings of the Advances in Information Retrieval, 2022

Overview of BioASQ Tasks 10a, 10b and Synergy10 in CLEF2022.

Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras

Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022

Overview of BioASQ 2022: The Tenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.

Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2022

Overview of DisTEMIST at BioASQ: Automatic detection and normalization of diseases from clinical texts: results, methods, evaluation and multilingual resources.

Antonio Miranda-Escalada, Luis Gascó, Salvador Lima-López, Eulàlia Farré-Maduell, Darryl Estrada, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger

Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022

2021

What is all this new MeSH about?

Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

Int. J. Digit. Libr., 2021

Harvesting the Public MeSH Note field.

Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

CoRR, 2021

What is all this new MeSH about? Exploring the semantic provenance of new descriptors in the MeSH thesaurus.

Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

CoRR, 2021

BioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering.

Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Martin Krallinger, Antonio Miranda

Proceedings of the Advances in Information Retrieval, 2021

Overview of BioASQ Tasks 9a, 9b and Synergy in CLEF2021.

Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras

Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

Overview of BioASQ 2021: The Ninth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.

Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2021

Overview of BioASQ 2021-MESINESP track. Evaluation of advance hierarchical classification techniques for scientific literature, patents and clinical trials.

Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Darryl Estrada-Zavala, Renato Toshiyuki Murasaki, Elena Primo-Peña, Cristina Bojo-Canales, Georgios Paliouras, Martin Krallinger

Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

2020

Beyond MeSH: Fine-grained semantic indexing of biomedical literature based on weak supervision.

Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras

Inf. Process. Manag., 2020

Splice site prediction across different organisms: A transfer learning approach.

Despoina Kalfakakou, Anastasia Krithara, Georgios Paliouras

Proceedings of the SETN 2020: 11th Hellenic Conference on Artificial Intelligence, 2020

BioASQ at CLEF2020: Large-Scale Biomedical Semantic Indexing and Question Answering.

Martin Krallinger, Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Marta Villegas

Proceedings of the Advances in Information Retrieval, 2020

Overview of MESINESP, a Spanish Medical Semantic Indexing Task within BioASQ 2020.

Carlos Rodríguez Penagos, Anastasios Nentidis, Aitor Gonzalez-Agirre, Alejandro Asensio, Jordi Armengol-Estapé, Anastasia Krithara, Marta Villegas, Georgios Paliouras, Martin Krallinger

Proceedings of the Working Notes of CLEF 2020, 2020

Overview of BioASQ 8a and 8b: Results of the Eighth Edition of the BioASQ Tasks a and b.

Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Georgios Paliouras

Proceedings of the Working Notes of CLEF 2020, 2020

Overview of BioASQ 2020: The Eighth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.

Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras

Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2020

iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge.

Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras

Proceedings of the 33rd IEEE International Symposium on Computer-Based Medical Systems, 2020

Drug-Drug Interaction Prediction on a Biomedical Literature Knowledge Graph.

Konstantinos Bougiatiotis, Fotis Aisopos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras

Proceedings of the Artificial Intelligence in Medicine, 2020

2019

Semantic integration of disease-specific knowledge.

Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras

CoRR, 2019

Results of the Seventh Edition of the BioASQ Challenge.

Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras

Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2019

iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine.

Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras

Proceedings of the 32nd IEEE International Symposium on Computer-Based Medical Systems, 2019

2018

Evaluation-as-a-Service for the Computational Sciences: Overview and Outlook.

Frank Hopfgartner, Allan Hanbury, Henning Müller, Ivan Eggel, Krisztian Balog, Torben Brodt, Gordon V. Cormack, Jimmy Lin, Jayashree Kalpathy-Cramer, Noriko Kando, Makoto P. Kato, Anastasia Krithara, Tim Gollub, Martin Potthast, Evelyne Viegas, Simon Mercer

ACM J. Data Inf. Qual., 2018

Measuring the Impact of Financial News and Social Media on Stock Market Modeling Using Time Series Mining Techniques.

Foteini Kollintza-Kyriakoulia, Manolis Maragoudakis, Anastasia Krithara

Algorithms, 2018

AI in Greece: The Case of Research on Linked Geospa al Data.

Manolis Koubarakis, George A. Vouros, Georgios Chalkiadakis, Vassilis P. Plagianakos, Christos Tjortjis, Ergina Kavallieratou, Dimitris Vrakas, Nikolaos Mavridis, Georgios Petasis, Konstantinos Blekas, Anastasia Krithara

AI Mag., 2018

2017

7th Open Challenge on Question Answering over Linked Data (QALD-7).

Ricardo Usbeck, Axel-Cyrille Ngonga Ngomo, Bastian Haarmann, Anastasia Krithara, Michael Röder, Giulio Napolitano

Proceedings of the Semantic Web Challenges, 2017

Splice Site Prediction: Transferring Knowledge Across Organisms.

Simos Kazantzidis, Anastasia Krithara, George Paliouras

Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2017), 2017

Results of the fifth edition of the BioASQ Challenge.

Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras, Ioannis A. Kakadiaris

Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

2016

Report on the SIGIR 2016 Workshop on Medical Information Retrieval (MedIR).

Lorraine Goeuriot, Steven Bedrick, Gareth J. F. Jones, Anastasia Krithara, Henning Müller, George Paliouras

SIGIR Forum, 2016

Medical Information Search Workshop (MEDIR).

Steven Bedrick, Lorraine Goeuriot, Gareth J. F. Jones, Anastasia Krithara, Henning Müller, George Paliouras

Proceedings of the 39th International ACM SIGIR conference on Research and Development in Information Retrieval, 2016

Author Profiling using Complementary Second Order Attributes and Stylometric Features.

Konstantinos Bougiatiotis, Anastasia Krithara

Proceedings of the Working Notes of CLEF 2016, 2016

2015

Report on the Evaluation-as-a-Service (EaaS) Expert Workshop.

Frank Hopfgartner, Allan Hanbury, Henning Müller, Noriko Kando, Simon Mercer, Jayashree Kalpathy-Cramer, Martin Potthast, Tim Gollub, Anastasia Krithara, Jimmy Lin, Krisztian Balog, Ivan Eggel

SIGIR Forum, 2015

Evaluation-as-a-Service: Overview and Outlook.

Allan Hanbury, Henning Müller, Krisztian Balog, Torben Brodt, Gordon V. Cormack, Ivan Eggel, Tim Gollub, Frank Hopfgartner, Jayashree Kalpathy-Cramer, Noriko Kando, Anastasia Krithara, Jimmy Lin, Simon Mercer, Martin Potthast

CoRR, 2015

An overview of the BIOASQ large-scale biomedical semantic indexing and question answering competition.

George Tsatsaronis, Georgios Balikas, Prodromos Malakasiotis, Ioannis Partalas, Matthias Zschunke, Michael R. Alvers, Dirk Weissenborn, Anastasia Krithara, Sergios Petridis, Dimitris Polychronopoulos, Yannis Almirantis, John Pavlopoulos, Nicolas Baskiotis, Patrick Gallinari, Thierry Artières, Axel-Cyrille Ngonga Ngomo, Norman Heino, Éric Gaussier, Liliana Barrio-Alvers, Michael Schroeder, Ion Androutsopoulos, Georgios Paliouras

BMC Bioinform., 2015

Media REVEALr: A Social Multimedia Monitoring and Intelligence System for Web Multimedia Verification.

Katerina Andreadou, Symeon Papadopoulos, Lazaros Apostolidis, Anastasia Krithara, Yiannis Kompatsiaris

Proceedings of the Intelligence and Security Informatics - Pacific Asia Workshop, 2015

Towards Open Domain Event Extraction from Twitter: REVEALing Entity Relations.

Gregory Katsios, Svitlana Vakulenko, Anastasia Krithara, Georgios Paliouras

Proceedings of the 4th International Workshop on Detection, 2015

BioASQ: A Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering.

Georgios Balikas, Anastasia Krithara, Ioannis Partalas, George Paliouras

Proceedings of the Multimodal Retrieval in the Medical Domain, 2015

Author Profiling using Stylometric and Structural Feature Groupings.

Andreas Grivas, Anastasia Krithara, George Giannakopoulos

Proceedings of the Working Notes of CLEF 2015, 2015

Results of the BioASQ Tasks of the Question Answering Lab at CLEF 2015.

Georgios Balikas, Aris Kosmopoulos, Anastasia Krithara, Georgios Paliouras, Ioannis A. Kakadiaris

Proceedings of the Working Notes of CLEF 2015, 2015

Predicting Sales Trends.

Vassiliki Rentoumi, Anastasia Krithara, Nikos Tzanos

Proceedings of the Sequences in Language and Text, 2015

2014

Splice Site Recognition Using Transfer Learning.

Georgios Giannoulis, Anastasia Krithara, Christos Karatsalos, Georgios Paliouras

Proceedings of the Artificial Intelligence: Methods and Applications, 2014

Results of the BioASQ Track of the Question Answering Lab at CLEF 2014.

Georgios Balikas, Ioannis Partalas, Axel-Cyrille Ngonga Ngomo, Anastasia Krithara, Georgios Paliouras

Proceedings of the Working Notes for CLEF 2014 Conference, 2014

Analysis and Classification of Constrained DNA Elements with N-gram Graphs and Genomic Signatures.

Dimitris Polychronopoulos, Anastasia Krithara, Christoforos Nikolaou, Georgios Paliouras, Yannis Almirantis, George Giannakopoulos

Proceedings of the Algorithms for Computational Biology - First International Conference, 2014

2013

TL-PLSA: Transfer Learning between Domains with Different Classes.

Anastasia Krithara, Georgios Paliouras

Proceedings of the 2013 IEEE 13th International Conference on Data Mining, 2013

2011

Learning aspect models with partially labeled data.

Anastasia Krithara, Massih-Reza Amini, Cyril Goutte, Jean-Michel Renders

Pattern Recognit. Lett., 2011

Ontology Population and Enrichment: State of the Art.

Georgios Petasis, Vangelis Karkaletsis, Georgios Paliouras, Anastasia Krithara, Elias Zavitsanos

Proceedings of the Knowledge-Driven Multimedia Information Extraction and Ontology Evolution, 2011

2010

An Extension of the Aspect PLSA Model to Active and Semi-Supervised Learning for Text Classification.

Anastasia Krithara, Massih-Reza Amini, Cyril Goutte, Jean-Michel Renders

Proceedings of the Artificial Intelligence: Theories, 2010

2008

Semi-supervised Document Classification with a Mislabeling Error Model.

Anastasia Krithara, Massih-Reza Amini, Jean-Michel Renders, Cyril Goutte

Proceedings of the Advances in Information Retrieval , 2008