Ananth Grama
Orcid: 0000-0002-9378-9244Affiliations:
- Purdue University, Center for Science of Information, West Lafayette, IN, USA
According to our database1,
Ananth Grama
authored at least 182 papers
between 1992 and 2024.
Collaborative distances:
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Bibliography
2024
Integrating ML/AI workflows in a Streaming Data Management and Processing Platform for Building Energy Research.
Proceedings of the Practice and Experience in Advanced Research Computing 2024: Human Powered Computing, 2024
2023
IEEE Trans. Inf. Theory, September, 2023
Trans. Mach. Learn. Res., 2023
Proceedings of the International Conference on Machine Learning, 2023
Proceedings of the Thirty Sixth Annual Conference on Learning Theory, 2023
2022
CKH: Causal Knowledge Hierarchy for Estimating Structural Causal Models from Data and Priors.
CoRR, 2022
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022
Proceedings of the IEEE International Symposium on Information Theory, 2022
Proceedings of the Thirty-Sixth AAAI Conference on Artificial Intelligence, 2022
2021
ACM Trans. Parallel Comput., 2021
Proceedings of the SIGMOD '21: International Conference on Management of Data, 2021
Proceedings of the 2021 IEEE International Conference on Image Processing, 2021
2020
Randomized Linear Algebra Approaches to Estimate the von Neumann Entropy of Density Matrices.
IEEE Trans. Inf. Theory, 2020
Database J. Biol. Databases Curation, 2020
Newton-ADMM: a distributed GPU-accelerated optimizer for multiclass classification problems.
Proceedings of the International Conference for High Performance Computing, 2020
Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020
A Unified Cloud-Native Architecture For Heterogeneous Data Aggregation And Computation.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020
Collaborative Cloud Computing Framework for Health Data with Open Source Technologies.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020
2019
BMC Bioinform., 2019
MG-RAST version 4 - lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis.
Briefings Bioinform., 2019
Briefings Bioinform., 2019
Proceedings of the 2019 SIAM International Conference on Data Mining, 2019
Proceedings of the Complex Networks and Their Applications VIII, 2019
2018
A Distributed Classifier for MicroRNA Target Prediction with Validation Through TCGA Expression Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2018
VAYU: Accelerating stream processing applications through dynamic network-aware topology re-optimization.
J. Parallel Distributed Comput., 2018
Proceedings of the 2018 World Wide Web Conference on World Wide Web, 2018
Proceedings of the 2018 World Wide Web Conference on World Wide Web, 2018
MODE: automated neural network model debugging via state differential analysis and input selection.
Proceedings of the 2018 ACM Joint Meeting on European Software Engineering Conference and Symposium on the Foundations of Software Engineering, 2018
Randomized Linear Algebra Approaches to Estimate the Von Neumann Entropy of Density Matrices.
Proceedings of the 2018 IEEE International Symposium on Information Theory, 2018
Proceedings of the 2018 IEEE International Parallel and Distributed Processing Symposium, 2018
2017
IEEE Trans. Parallel Distributed Syst., 2017
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
Triangular Alignment (TAME): A Tensor-Based Approach for Higher-Order Network Alignment.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
A Critical Survey of Deconvolution Methods for Separating Cell Types in Complex Tissues.
Proc. IEEE, 2017
Rafiki: a middleware for parameter tuning of NoSQL datastores for dynamic metagenomics workloads.
Proceedings of the 18th ACM/IFIP/USENIX Middleware Conference, Las Vegas, NV, USA, December 11, 2017
Proceedings of the 2017 IEEE International Symposium on Information Theory, 2017
Proceedings of the 2017 IEEE International Parallel and Distributed Processing Symposium Workshops, 2017
Proceedings of the 37th IEEE International Conference on Distributed Computing Systems, 2017
Proceedings of the 9th International Conference on Communication Systems and Networks, 2017
2016
IEEE Trans. Mol. Biol. Multi Scale Commun., 2016
Social ties and checkin sites: connections and latent structures in location-based social networks.
Soc. Netw. Anal. Min., 2016
Combining Density and Overlap (CoDO): A New Method for Assessing the Significance of Overlap Among Subgraphs.
CoRR, 2016
Fundamental Bounds and Approaches to Sequence Reconstruction from Nanopore Sequencers.
CoRR, 2016
Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions.
BMC Syst. Biol., 2016
A convex optimization approach for identification of human tissue-specific interactomes.
Bioinform., 2016
Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016
Proceedings of the IEEE International Conference on Data Mining Workshops, 2016
Proceedings of the 8th International Conference on Communication Systems and Networks, 2016
Closing the Data Loop: An Integrated Open Access Analysis Platform for the MIMIC Database.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016
De novo identification of cell type hierarchy with application to compound marker detection.
Proceedings of the 7th ACM International Conference on Bioinformatics, 2016
2015
Scope and limitations of yeast as a model organism for studying human tissue-specific pathways.
BMC Syst. Biol., 2015
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015
Proceedings of the 6th ACM Conference on Bioinformatics, 2015
2014
Quantum Inf. Process., 2014
J. Parallel Distributed Comput., 2014
J. Comput. Phys., 2014
2013
Concurrent programming constructs for parallel MPI applications - The MPI threads library.
J. Supercomput., 2013
A Universal Quantum Circuit Scheme For Finding Complex Eigenvalues of Non-unitary Matrices
CoRR, 2013
BMC Syst. Biol., 2013
Using hierarchical data mining to characterize performance of wireless system configurations.
Adv. Eng. Softw., 2013
Suffix-Tree Based Error Correction of NGS Reads Using Multiple Manifestations of an Error.
Proceedings of the ACM Conference on Bioinformatics, 2013
M-Lock: Accelerating Distributed Transactions on Key-Value Stores through Dynamic Lock Localization.
Proceedings of the 2013 IEEE Sixth International Conference on Cloud Computing, Santa Clara, CA, USA, June 28, 2013
2012
Network Similarity Decomposition (NSD): A Fast and Scalable Approach to Network Alignment.
IEEE Trans. Knowl. Data Eng., 2012
SIAM J. Sci. Comput., 2012
Parallel Comput., 2012
Role of Synthetic Genetic Interactions in Understanding Functional Interactions Among Pathways.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012
Parallel Numerical Computing from Illiac IV to Exascale - The Contributions of Ahmed H. Sameh.
Proceedings of the High-Performance Scientific Computing - Algorithms and Applications., 2012
2011
Proceedings of the Encyclopedia of Parallel Computing, 2011
Proceedings of the Encyclopedia of Parallel Computing, 2011
Proceedings of the 3rd USENIX Workshop on Hot Topics in Cloud Computing, 2011
2010
Weighted Matrix Ordering and Parallel Banded Preconditioners for Iterative Linear System Solvers.
SIAM J. Sci. Comput., 2010
Functional characterization and topological modularity of molecular interaction networks.
BMC Bioinform., 2010
Proceedings of the 2010 IEEE International Conference on Cluster Computing, 2010
2009
Proceedings of the Encyclopedia of Optimization, Second Edition, 2009
2008
J. Parallel Distributed Comput., 2008
Proceedings of the Static Analysis, 15th International Symposium, 2008
Proceedings of the 2008 ACM Symposium on Applied Computing (SAC), 2008
Proceedings of the Biocomputing 2008, 2008
Proceedings of the High Performance Computing, 2008
Proceedings of the ECCB'08 Proceedings, 2008
2007
Proceedings of the Handbook of Parallel Computing - Models, Algorithms and Applications., 2007
Randomized Protocols for Duplicate Elimination in Peer-to-Peer Storage Systems.
IEEE Trans. Parallel Distributed Syst., 2007
Assessing Significance of Connectivity and Conservation in Protein Interaction Networks.
J. Comput. Biol., 2007
Identifying Statistical Dependence in Genomic Sequences via Mutual Information Estimates.
EURASIP J. Bioinform. Syst. Biol., 2007
Proceedings of the ACM SIGPLAN 2007 Conference on Programming Language Design and Implementation, 2007
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007
Proceedings of the IEEE International Symposium on Information Theory, 2007
Proceedings of the 29th International Conference on Software Engineering (ICSE 2007), 2007
Proceedings of the Computational Science, 2007
Proceedings of the 2007 EuroSys Conference, Lisbon, Portugal, March 21-23, 2007, 2007
2006
ACM Trans. Sens. Networks, 2006
Nonorthogonal decomposition of binary matrices for bounded-error data compression and analysis.
ACM Trans. Math. Softw., 2006
Parallel Comput., 2006
J. Comput. Biol., 2006
CONQUEST: A Coarse-Grained Algorithm for Constructing Summaries of Distributed Discrete Datasets.
Algorithmica, 2006
Proceedings of the 21st IEEE/ACM International Conference on Automated Software Engineering (ASE 2006), 2006
Proceedings of the Computational Science, 2006
Proceedings of the 39th Hawaii International International Conference on Systems Science (HICSS-39 2006), 2006
Proceedings of the Fundamental Approaches to Software Engineering, 2006
2005
Compression, Clustering, and Pattern Discovery in Very High-Dimensional Discrete-Attribute Data Sets.
IEEE Trans. Knowl. Data Eng., 2005
Proceedings of the Second Annual IEEE Communications Society Conference on Sensor and Ad Hoc Communications and Networks, 2005
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution.
Proceedings of the Research in Computational Molecular Biology, 2005
Proceedings of the Fifth IEEE International Conference on Peer-to-Peer Computing (P2P 2005), 31 August, 2005
Proceedings of the Computational Science, 2005
2004
Proceedings of the First Annual IEEE Communications Society Conference on Sensor and Ad Hoc Communications and Networks, 2004
Conquest: A Distributed Tool for Constructing Summaries of High-Dimensional Discrete Attribute Data Sets.
Proceedings of the Fourth SIAM International Conference on Data Mining, 2004
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
Proceedings of the 23rd IEEE International Performance Computing and Communications Conference, 2004
Impact of far-field interactions on performance of multipole-based preconditioners for sparse linear systems.
Proceedings of the 18th Annual International Conference on Supercomputing, 2004
Proceedings of the 10th International Conference on Parallel and Distributed Systems, 2004
Distributed and Dynamic Voronoi Overlays for Coverage Detection and Distributed Hash Tables in Ad-Hoc Networks.
Proceedings of the 10th International Conference on Parallel and Distributed Systems, 2004
A Secure Crediting Protocol for Hybrid Cellular and Ad-Hoc Networks.
Proceedings of the ICETE 2004, 2004
Proceedings of the 24th International Conference on Distributed Computing Systems (ICDCS 2004), 2004
Proceedings of the Computational Science, 2004
Proceedings of the High Performance Computing, 2004
Proceedings of the High Performance Computing, 2004
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004
2003
Parallel Comput., 2003
PROXIMUS: a framework for analyzing very high dimensional discrete-attributed datasets.
Proceedings of the Ninth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Washington, DC, USA, August 24, 2003
Spectral LPM: An Optimal Locality-Preserving Mapping using the Spectral (not Fractal) Order.
Proceedings of the 19th International Conference on Data Engineering, 2003
Proceedings of the 36th Hawaii International Conference on System Sciences (HICSS-36 2003), 2003
Proceedings of the Global Telecommunications Conference, 2003
Algorithms for Bounded-Error Correlation of High Dimensional Data in Microarray Experiments.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003
2002
2D-pattern matching image and video compression: theory, algorithms, and experiments.
IEEE Trans. Image Process., 2002
Proceedings of the Principles of Data Mining and Knowledge Discovery, 2002
A Secure Protocol for Computing Dot-Products in Clustered and Distributed Environments.
Proceedings of the 31st International Conference on Parallel Processing (ICPP 2002), 2002
Proceedings of the 31st International Conference on Parallel Processing (ICPP 2002), 2002
Oceanus: A Distributed Web-Based Framework for Execution of Genetic Algorithms.
Proceedings of the Late Breaking papers at the Genetic and Evolutionary Computation Conference (GECCO-2002), 2002
Proceedings of the 2002 Data Compression Conference (DCC 2002), 2002
2001
ACM Trans. Math. Softw., 2001
Proceedings of the Computational Science - ICCS 2001, 2001
Proceedings of the Data Compression Conference, 2001
2000
Proceedings of the Data Compression Conference, 2000
1999
IEEE Trans. Knowl. Data Eng., 1999
Computer, 1999
Proceedings of the ACM/IEEE Conference on Supercomputing, 1999
Proceedings of the Data Compression Conference, 1999
1998
SIAM J. Sci. Comput., 1998
Scalable Parallel Formulations of the Barnes-Hut Method for <i>n</i>-Body Simulations.
Parallel Comput., 1998
Proceedings of the ACM/IEEE Conference on Supercomputing, 1998
1997
Role of Message-Passing in Performance Oriented Parallel Programming.
Proceedings of the Eighth SIAM Conference on Parallel Processing for Scientific Computing, 1997
1995
INFORMS J. Comput., 1995
Proceedings of the Proceedings Supercomputing '95, San Diego, CA, USA, December 4-8, 1995, 1995
Fast volume rendering using an efficient, scalable parallel formulation of the shear-warp algorithm.
Proceedings of the IEEE Symposium on Parallel Rendering, 1995
N-Body Simulations Using Message Passsing Parallel Computers.
Proceedings of the Seventh SIAM Conference on Parallel Processing for Scientific Computing, 1995
1994
J. Parallel Distributed Comput., 1994
Introduction to Parallel Computing.
Benjamin/Cummings, ISBN: 0-8053-3170-0, 1994
1993
IEEE Parallel Distributed Technol. Syst. Appl., 1993
1992
Scalability Analysis of Partitioning Strategies for Finite Element Graphs: A Summary of Results.
Proceedings of the Proceedings Supercomputing '92, 1992