Ana Tereza Ribeiro de Vasconcelos

Orcid: 0000-0002-4632-2086

According to our database1, Ana Tereza Ribeiro de Vasconcelos authored at least 33 papers between 2000 and 2023.

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Bibliography

2023
Multi-layered transcriptomic analysis reveals a pivotal role of <i>FMR1</i> and other developmental genes in Alzheimer's disease-associated brain ceRNA network.
Comput. Biol. Medicine, November, 2023

2022
Genomic Perspectives on the Emerging SARS-CoV-2 Omicron Variant.
Genom. Proteom. Bioinform., 2022

2021
A model of dopamine and serotonin-kynurenine metabolism in cortisolemia: Implications for depression.
PLoS Comput. Biol., 2021

Large-Scale Protein Interactions Prediction by Multiple Evidence Analysis Associated With an In-Silico Curation Strategy.
Frontiers Bioinform., 2021

2020
BioinfoPortal: A scientific gateway for integrating bioinformatics applications on the Brazilian national high-performance computing network.
Future Gener. Comput. Syst., 2020

OCCAM: prediction of small ORFs in bacterial genomes by means of a target-decoy database approach and machine learning techniques.
Database J. Biol. Databases Curation, 2020

2019
OntoPPI: Towards Data Formalization on the Prediction of Protein Interactions.
Proceedings of the Metadata and Semantic Research - 13th International Conference, 2019

Towards a Science Gateway for Bioinformatics: Experiences in the Brazilian System of High Performance Computing.
Proceedings of the 19th IEEE/ACM International Symposium on Cluster, 2019

2018
BioWorkbench: A High-Performance Framework for Managing and Analyzing Bioinformatics Experiments.
CoRR, 2018

2017
Erratum to: Mirnacle: machine learning with SMOTE and random forest for improving selectivity in pre-miRNA ab initio prediction.
BMC Bioinform., 2017

2016
Mirnacle: machine learning with SMOTE and random forest for improving selectivity in pre-miRNA ab initio prediction.
BMC Bioinform., 2016

2015
BioSurfDB: knowledge and algorithms to support biosurfactants and biodegradation studies.
Database J. Biol. Databases Curation, 2015

2014
Laminin-database v.2.0: an update on laminins in health and neuromuscular disorders.
Nucleic Acids Res., 2014

2011
Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins.
Nucleic Acids Res., 2011

2010
AGUIA: autonomous graphical user interface assembly for clinical trials semantic data services.
BMC Medical Informatics Decis. Mak., 2010

2009
A Simple and Fast Term Selection Procedure for Text Clustering.
Proceedings of the Intelligent Text Categorization and Clustering, 2009

CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens.
Nucleic Acids Res., 2009

DASMiner: discovering and integrating data from DAS sources.
BMC Syst. Biol., 2009

Conservation of key members in the course of the evolution of the insulin signaling pathway.
Biosyst., 2009

2008
Parameter optimization in S-system models.
BMC Syst. Biol., 2008

Structural descriptor database: a new tool for sequence-based functional site prediction.
BMC Bioinform., 2008

Prediction of TF target sites based on atomistic models of protein-DNA complexes.
BMC Bioinform., 2008

Application of Genetic Algorithms to the Genetic Regulation Problem.
Proceedings of the Advances in Bioinformatics and Computational Biology, 2008

2007
Tractor_DB (version 2.0): a database of regulatory interactions in gamma-proteobacterial genomes.
Nucleic Acids Res., 2007

Automated smoother for the numerical decoupling of dynamics models.
BMC Bioinform., 2007

2005
TRACTOR_DB: a database of regulatory networks in gamma-proteobacterial genomes.
Nucleic Acids Res., 2005

MamMiBase: a mitochondrial genome database for mammalian phylogenetic studies.
Bioinform., 2005

Web Tools for Molecular Biological Data Analysis.
Proceedings of the Encyclopedia of Information Science and Technology (5 Volumes), 2005

2004
Complementing computationally predicted regulatory sites in Tractor_DB using a pattern matching approach.
Silico Biol., 2004

A System for Automated Bacterial (genome) Integrated Annotation - SABIA.
Bioinform., 2004

2003
Procsimo: uma Ferramenta de Procura de Similaridade entre Operons.
Proceedings of the II Brazilian Workshop on Bioinformatics, 2003

2001
A Tool for Automatic Genome Annotation.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

2000
Short interrupted palindromes on the extragenic DNA of Escherichia coli K-12, Haemophilus influenzae and Neisseria meningitidis.
Bioinform., 2000


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