Ana-Nicoleta Bondar

According to our database, Ana-Nicoleta Bondar authored at least 11 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2023

Fentanyl and the Fluorinated Fentanyl Derivative NFEPP Elicit Distinct Hydrogen-Bond Dynamics of the Opioid Receptor.

Samo Lesnik, Urban Bren, Tatiana Domratcheva, Ana-Nicoleta Bondar

J. Chem. Inf. Model., August, 2023

2021

Interactive Interface for Graph-Based Analyses of Dynamic H-Bond Networks: Application to Spike Protein S.

Malte Siemers, Ana-Nicoleta Bondar

J. Chem. Inf. Model., 2021

CHARMM Force-Field Parameters for Morphine, Heroin, and Oliceridine, and Conformational Dynamics of Opioid Drugs.

Thomas Giannos, Samo Lesnik, Urban Bren, Milan Hodoscek, Tatiana Domratcheva, Ana-Nicoleta Bondar

J. Chem. Inf. Model., 2021

C-Graphs Tool with Graphical User Interface to Dissect Conserved Hydrogen-Bond Networks: Applications to Visual Rhodopsins.

Éva Bertalan, Elena Lesca, Gebhard F. X. Schertler, Ana-Nicoleta Bondar

J. Chem. Inf. Model., 2021

2020

Potential Energy Function for Fentanyl-Based Opioid Pain Killers.

Samo Lesnik, Milan Hodoscek, Urban Bren, Christoph Stein, Ana-Nicoleta Bondar

J. Chem. Inf. Model., 2020

Potential energy function for a photo-switchable lipid molecule.

Oskar Klaja, James A. Frank, Dirk Trauner, Ana-Nicoleta Bondar

J. Comput. Chem., 2020

Cover Image.

Oskar Klaja, James A. Frank, Dirk Trauner, Ana-Nicoleta Bondar

J. Comput. Chem., 2020

2019

Using Graphs of Dynamic Hydrogen-Bond Networks To Dissect Conformational Coupling in a Protein Motor.

Konstantina Karathanou, Ana-Nicoleta Bondar

J. Chem. Inf. Model., 2019

2018

Revised CHARMM force field parameters for iron-containing cofactors of photosystem II.

Suliman Adam, Michaela Knapp-Mohammady, Jun Yi, Ana-Nicoleta Bondar

J. Comput. Chem., 2018

2013

Exploring cavity dynamics in biomolecular systems.

Norbert Lindow, Daniel Baum, Ana-Nicoleta Bondar, Hans-Christian Hege

BMC Bioinform., 2013

2012

Dynamic channels in biomolecular systems: Path analysis and visualization.

Norbert Lindow, Daniel Baum, Ana-Nicoleta Bondar, Hans-Christian Hege

Proceedings of the 2012 IEEE Symposium on Biological Data Visualization, 2012