An-Yuan Guo

According to our database, An-Yuan Guo authored at least 38 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

TCRosetta: An Integrated Analysis and Annotation Platform for T-cell Receptor Sequences.

Tao Yue, Si-Yi Chen, Wen-Kang Shen, Zhan-Ye Zhang, Liming Cheng, An-Yuan Guo

Genom. Proteom. Bioinform., 2024

2023

lncRNASNP v3: an updated database for functional variants in long non-coding RNAs.

Yanbo Yang, Dongyang Wang, Ya-Ru Miao, Xiaohong Wu, Haohui Luo, Wen Cao, Wenqian Yang, Jianye Yang, An-Yuan Guo, Jing Gong

Nucleic Acids Res., January, 2023

AnimalTFDB 4.0: a comprehensive animal transcription factor database updated with variation and expression annotations.

Wen-Kang Shen, Si-Yi Chen, Zi-Quan Gan, Yu-Zhu Zhang, Tao Yue, Miaomiao Chen, Yu Xue, Hui Hu, An-Yuan Guo

Nucleic Acids Res., January, 2023

GSCA: an integrated platform for gene set cancer analysis at genomic, pharmacogenomic and immunogenomic levels.

Chun-Jie Liu, Fei-Fei Hu, Gui-Yan Xie, Ya-Ru Miao, Xin-Wen Li, Yan Zeng, An-Yuan Guo

Briefings Bioinform., January, 2023

2022

EVAtlas: a comprehensive database for ncRNA expression in human extracellular vesicles.

Chun-Jie Liu, Gui-Yan Xie, Ya-Ru Miao, Meng-Xuan Xia, Yi Wang, Qian Lei, Qiong Zhang, An-Yuan Guo

Nucleic Acids Res., 2022

ImmuCellAI-mouse: a tool for comprehensive prediction of mouse immune cell abundance and immune microenvironment depiction.

Ya-Ru Miao, Meng-Xuan Xia, Mei Luo, Tao Luo, Mei Yang, An-Yuan Guo

Bioinform., 2022

EVAtool: an optimized reads assignment tool for small ncRNA quantification and its application in extracellular vesicle datasets.

Gui-Yan Xie, Chun-Jie Liu, An-Yuan Guo

Briefings Bioinform., 2022

2021

Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021.

Yongbiao Xue, Yiming Bao, Zhang Zhang, Wenming Zhao, Jing-Fa Xiao, Shunmin He, Guoqing Zhang, Yixue Li, Guoping Zhao, Runsheng Chen, Shuhui Song, Lina Ma, Dong Zou, Dongmei Tian, Cuiping Li, Junwei Zhu, Zheng Gong, Meili Chen, Anke Wang, Yingke Ma, Mengwei Li, Xufei Teng, Ying Cui, Guangya Duan, Mochen Zhang, Tong Jin, Chengmin Shi, Zhenglin Du, Yadong Zhang, Chuandong Liu, Rujiao Li, Jingyao Zeng, Lili Hao, Shuai Jiang, Hua Chen, Dali Han, Tao Zhang, Wang Kang, Fei Yang, Jing Qu, Weiqi Zhang, Guanghui Liu, Lin Liu, Yang Zhang, Guangyi Niu, Tongtong Zhu, Changrui Feng, Xiaonan Liu, Yuansheng Zhang, Zhao Li, Ruru Chen, Qianpeng Li, Zhongyi Hua, Chao Jiang, Ziyuan Chen, Fangshu He, Yuyang Zhao, Yan Jin, Luqi Huang, Yuan Yuan, Chenfen Zhou, Qingwei Xu, Sheng He, Wei Ye, Ruifang Cao, Pengyu Wang, Yunchao Ling, Xing Yan, Qingzhong Wang, Qiang Du, Wenting Zong, Hongen Kang, Zhuang Xiong, Wendi Huan, Sirui Zhang, Qiguang Xia, Xiaojuan Fan, Zefeng Wang, Xu Chen, Tingting Chen, Sisi Zhang, Bixia Tang, Lili Dong, Zhewen Zhang, Zhonghuang Wang, Hailong Kang, Yanqing Wang, Song Wu, Ming Chen, Chang Liu, Yujia Xiong, Xueying Shao, Yanyan Li, Honghong Zhou, Xiaomin Chen, Yu Zheng, Quan Kang, Di Hao, Lili Zhang, Huaxia Luo, Yajing Hao, Peng Zhang, Zhi Nie, Shuhuan Yu, Jian Sang, Zhaohua Li, Xiangquan Zhang, Qing Zhou, Shuang Zhai, Yaping Zhang, Guodong Wang, Qianghui Zhu, Xin Li, Menghua Li, Jun Yan, Chen Li, Zhennan Wang, Xiangfeng Wang, Yuanming Liu, Hong Luo, Xiaoyuan Wu, Hai-Chun Jing, Lianhe Zhao, Jiajia Wang, Tinrui Song, Yi Zhao, Furrukh Mehmood, Shahid Ali, Amjad Ali, Shoaib Saleem, Irfan Hussain, Amir Ali Abbasi, Zhixiang Zuo, Jian Ren, Xinxin Zhang, Yun Xiao, Xia Li, Yiran Tu, Yu Xue, Wanying Wu, Peifeng Ji, Fangqing Zhao, Xianwen Meng, Di Peng, Hao Luo, Feng Gao, Wanshan Ning, Shaofeng Lin, Teng Liu, An-Yuan Guo, Hao Yuan, Yong E. Zhang, Xiaodan Tan, Weizhi Zhang, Yubin Xie, Chenwei Wang, Chun-Jie Liu, De-Chang Yang, Feng Tian, Ge Gao, Dachao Tang, Lan Yao, Qinghua Cui, Ni A. An, Chuan-Yun Li, Xiaotong Luo

Nucleic Acids Res., 2021

miRNASNP-v3: a comprehensive database for SNPs and disease-related variations in miRNAs and miRNA targets.

Chun-Jie Liu, Xin Fu, Meng-Xuan Xia, Qiong Zhang, Zhifeng Gu, An-Yuan Guo

Nucleic Acids Res., 2021

TCRdb: a comprehensive database for T-cell receptor sequences with powerful search function.

Si-Yi Chen, Tao Yue, Qian Lei, An-Yuan Guo

Nucleic Acids Res., 2021

CCLA: an accurate method and web server for cancer cell line authentication using gene expression profiles.

Qiong Zhang, Mei Luo, Chun-Jie Liu, An-Yuan Guo

Briefings Bioinform., 2021

A comprehensive survey for human transcription factors on expression, regulation, interaction, phenotype and cancer survival.

Hui Hu, Qiong Zhang, Fei-Fei Hu, Chun-Jie Liu, An-Yuan Guo

Briefings Bioinform., 2021

Expression profile of immune checkpoint genes and their roles in predicting immunotherapy response.

Fei-Fei Hu, Chun-Jie Liu, Lan-Lan Liu, Qiong Zhang, An-Yuan Guo

Briefings Bioinform., 2021

2020

SNP2APA: a database for evaluating effects of genetic variants on alternative polyadenylation in human cancers.

Yanbo Yang, Qiong Zhang, Ya-Ru Miao, Jiajun Yang, Wenqian Yang, Fangda Yu, Dongyang Wang, An-Yuan Guo, Jing Gong

Nucleic Acids Res., 2020

hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets.

Qiong Zhang, Wei Liu, Hong-Mei Zhang, Gui-Yan Xie, Ya-Ru Miao, Meng-Xuan Xia, An-Yuan Guo

Genom. Proteom. Bioinform., 2020

FFLtool: a web server for transcription factor and miRNA feed forward loop analysis in human.

Gui-Yan Xie, Meng-Xuan Xia, Ya-Ru Miao, Mei Luo, Qiong Zhang, An-Yuan Guo

Bioinform., 2020

An ultra-sensitive T-cell receptor detection method for TCR-Seq and RNA-Seq data.

Si-Yi Chen, Chun-Jie Liu, Qiong Zhang, An-Yuan Guo

Bioinform., 2020

Landscape of cancer diagnostic biomarkers from specifically expressed genes.

Yao Lv, Sheng-Yan Lin, Fei-Fei Hu, Zheng Ye, Qiong Zhang, Yan Wang, An-Yuan Guo

Briefings Bioinform., 2020

2019

SAGD: a comprehensive sex-associated gene database from transcriptomes.

Meng-Wei Shi, Na-An Zhang, Chuan-Ping Shi, Chun-Jie Liu, Zhi-Hui Luo, Dan-Yang Wang, An-Yuan Guo, Zhen-Xia Chen

Nucleic Acids Res., 2019

EVmiRNA: a database of miRNA profiling in extracellular vesicles.

Teng Liu, Qiong Zhang, Jiankun Zhang, Chao Li, Ya-Ru Miao, Qian Lei, Qiubai Li, An-Yuan Guo

Nucleic Acids Res., 2019

AnimalTFDB 3.0: a comprehensive resource for annotation and prediction of animal transcription factors.

Hui Hu, Ya-Ru Miao, Long-Hao Jia, Qing-Yang Yu, Qiong Zhang, An-Yuan Guo

Nucleic Acids Res., 2019

Pancan-meQTL: a database to systematically evaluate the effects of genetic variants on methylation in human cancer.

Jing Gong, Hao Wan, Shufang Mei, Hang Ruan, Zhao Zhang, Chun-Jie Liu, An-Yuan Guo, Lixia Diao, Xiaoping Miao, Leng Han

Nucleic Acids Res., 2019

Transcriptome and Regulatory Network Analyses of CD19-CAR-T Immunotherapy for B-ALL.

Qiong Zhang, Hui Hu, Si-Yi Chen, Chun-Jie Liu, Fei-Fei Hu, Jianming Yu, Yaohui Wu, An-Yuan Guo

Genom. Proteom. Bioinform., 2019

SEGreg: a database for human specifically expressed genes and their regulations in cancer and normal tissue.

Qin Tang, Qiong Zhang, Yao Lv, Ya-Ru Miao, An-Yuan Guo

Briefings Bioinform., 2019

2018

lncRNASNP2: an updated database of functional SNPs and mutations in human and mouse lncRNAs.

Ya-Ru Miao, Wei Liu, Qiong Zhang, An-Yuan Guo

Nucleic Acids Res., 2018

PancanQTL: systematic identification of cis-eQTLs and trans-eQTLs in 33 cancer types.

Jing Gong, Shufang Mei, Chun-Jie Liu, Yu Xiang, Youqiong Ye, Zhao Zhang, Jing Feng, Renyan Liu, Lixia Diao, An-Yuan Guo, Xiaoping Miao, Leng Han

Nucleic Acids Res., 2018

GSCALite: a web server for gene set cancer analysis.

Chun-Jie Liu, Fei-Fei Hu, Meng-Xuan Xia, Leng Han, Qiong Zhang, An-Yuan Guo

Bioinform., 2018

SEGtool: a specifically expressed gene detection tool and applications in human tissue and single-cell sequencing data.

Qiong Zhang, Wei Liu, Chun-Jie Liu, Sheng-Yan Lin, An-Yuan Guo

Briefings Bioinform., 2018

2017

LNCediting: a database for functional effects of RNA editing in lncRNAs.

Jing Gong, Chun-Jie Liu, Wei Liu, Yu Xiang, Lixia Diao, An-Yuan Guo, Leng Han

Nucleic Acids Res., 2017

2015

AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors.

Hong-Mei Zhang, Teng Liu, Chun-Jie Liu, Shuangyang Song, Xiantong Zhang, Wei Liu, Haibo Jia, Yu Xue, An-Yuan Guo

Nucleic Acids Res., 2015

lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse.

Jing Gong, Wei Liu, Jiayou Zhang, Xiaoping Miao, An-Yuan Guo

Nucleic Acids Res., 2015

An update of miRNASNP database for better SNP selection by GWAS data, miRNA expression and online tools.

Jing Gong, Chun-Jie Liu, Wei Liu, Yuliang Wu, Zhaowu Ma, Hu Chen, An-Yuan Guo

Database J. Biol. Databases Curation, 2015

Transcription factor and microRNA co-regulatory loops: important regulatory motifs in biological processes and diseases.

Hong-Mei Zhang, Shuzhen Kuang, Xushen Xiong, Tianliuyun Gao, Chenglin Liu, An-Yuan Guo

Briefings Bioinform., 2015

2012

AnimalTFDB: a comprehensive animal transcription factor database.

Hong-Mei Zhang, Hu Chen, Wei Liu, Hui Liu, Jing Gong, Huili Wang, An-Yuan Guo

Nucleic Acids Res., 2012

miRNASNP: a database of miRNA related SNPs and their effects on miRNA function.

Jing Gong, Yin Tong, Hong-Mei Zhang, An-Yuan Guo

BMC Bioinform., 2012

2011

CADgene: a comprehensive database for coronary artery disease genes.

Hui Liu, Wei Liu, Yifang Liao, Long Cheng, Qian Liu, Xiang Ren, Lisong Shi, Xin Tu, Qing Kenneth Wang, An-Yuan Guo

Nucleic Acids Res., 2011

2010

A Novel microRNA and transcription factor mediated regulatory network in schizophrenia.

An-Yuan Guo, Jingchun Sun, Peilin Jia, Zhongming Zhao

BMC Syst. Biol., 2010

2009

ERGR: An ethanol-related gene resource.

An-Yuan Guo, Bradley Todd Webb, Michael F. Miles, Mark P. Zimmerman, Kenneth S. Kendler, Zhongming Zhao

Nucleic Acids Res., 2009