Allen G. Rodrigo

According to our database, Allen G. Rodrigo authored at least 13 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Mugen-UMAP: UMAP visualization and clustering of mutated genes in single-cell DNA sequencing data.

Teng Li, Yiran Zou, Xianghan Li, Thomas K. F. Wong, Allen G. Rodrigo

BMC Bioinform., December, 2024

ViPRA-Haplo: De Novo Reconstruction of Viral Populations Using Paired End Sequencing Data.

Weiling Li, Raunaq Malhotra, Steven H. Wu, Manjari Jha, Allen G. Rodrigo, Mary Poss, Raj Acharya

IEEE ACM Trans. Comput. Biol. Bioinform., 2024

2021

An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes.

Thomas K. F. Wong, Teng Li, Louis Ranjard, Steven H. Wu, Jeet Sukumaran, Allen G. Rodrigo

PLoS Comput. Biol., 2021

2020

Correction to: Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage.

Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo

BMC Bioinform., 2020

2019

Effective machine-learning assembly for next-generation amplicon sequencing with very low coverage.

Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo

BMC Bioinform., 2019

2018

HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrations.

Thomas K. F. Wong, Louis Ranjard, Yu Lin, Allen G. Rodrigo

BMC Bioinform., 2018

2015

Neutral Models of Microbiome Evolution.

Qinglong Zeng, Jeet Sukumaran, Steven H. Wu, Allen G. Rodrigo

PLoS Comput. Biol., 2015

Estimation of evolutionary parameters using short, random and partial sequences from mixed samples of anonymous individuals.

Steven H. Wu, Allen G. Rodrigo

BMC Bioinform., 2015

2012

A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels.

Steven H. Wu, Michael A. Black, Robyn A. North, Allen G. Rodrigo

BMC Bioinform., 2012

2009

A Statistical Model to Identify Differentially Expressed Proteins in 2D PAGE Gels.

Steven H. Wu, Michael A. Black, Robyn A. North, Kelly R. Atkinson, Allen G. Rodrigo

PLoS Comput. Biol., 2009

2007

SQUINT: a multiple alignment program and editor.

Matthew Goode, Allen G. Rodrigo

Bioinform., 2007

2005

Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type-1.

Peter L. Meintjes, Allen G. Rodrigo

J. Bioinform. Comput. Biol., 2005

2004

A Brief Introduction to the Phylogentics Analysis Library V1.5.

Matthew Goode, Korbinian Strimmer, Alexei J. Drummond, Ed Buckler, Allen G. Rodrigo

Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC 2004), 2004