Alison A. Motsinger-Reif

Orcid: 0000-0003-1346-2493

According to our database1, Alison A. Motsinger-Reif authored at least 35 papers between 2005 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Taxanorm: a novel taxa-specific normalization approach for microbiome data.
BMC Bioinform., December, 2024

Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests.
Int. J. Medical Informatics, 2024

2022
Visualization, benchmarking and characterization of nested single-cell heterogeneity as dynamic forest mixtures.
Briefings Bioinform., 2022

2021
Knockoff boosted tree for model-free variable selection.
Bioinform., 2021

Prediction of synergistic drug combinations using PCA-initialized deep learning.
BioData Min., 2021

2019
Identifying individual risk rare variants using protein structure guided local tests (POINT).
PLoS Comput. Biol., 2019

Cheminformatics approach to exploring and modeling trait-associated metabolite profiles.
J. Cheminformatics, 2019

2018
Gene set analysis methods: a systematic comparison.
BioData Min., 2018

2015
An investigation of gene-gene interactions in dose-response studies with Bayesian nonparametrics.
BioData Min., 2015

2014
Bayesian neural networks for detecting epistasis in genetic association studies.
BMC Bioinform., 2014

PGxClean: a quality control GUI for the Affymetrix DMET chip and other candidate gene studies with non-biallelic alleles.
BioData Min., 2014

An adaptive permutation approach for genome-wide association study: evaluation and recommendations for use.
BioData Min., 2014

2013
Risk score modeling of multiple gene to gene interactions using aggregated-multifactor dimensionality reduction.
BioData Min., 2013

2012
Global tests of P-values for multifactor dimensionality reduction models in selection of optimal number of target genes.
BioData Min., 2012

Multivariate methods and software for association mapping in dose-response genome-wide association studies.
BioData Min., 2012

Grammatical evolution support vector machines for predicting human genetic disease association.
Proceedings of the Genetic and Evolutionary Computation Conference, 2012

A comparison of GE optimized neural networks and decision trees.
Proceedings of the Genetic and Evolutionary Computation Conference, 2012

2011
An R package implementation of multifactor dimensionality reduction.
BioData Min., 2011

Optimization of grammatical evolution decision trees.
Proceedings of the 13th Annual Genetic and Evolutionary Computation Conference, 2011

The power of quantitative grammatical evolution neural networks to detect gene-gene interactions.
Proceedings of the 13th Annual Genetic and Evolutionary Computation Conference, 2011

2010
A comparison of internal validation techniques for multifactor dimensionality reduction.
BMC Bioinform., 2010

Grammatical evolution decision trees for detecting gene-gene interactions.
BioData Min., 2010

Grammatical Evolution Decision Trees for Detecting Gene-Gene Interactions.
Proceedings of the Evolutionary Computation, 2010

2008
Neural networks for genetic epidemiology: past, present, and future.
BioData Min., 2008

A balanced accuracy fitness function leads to robust analysis using grammatical evolution neural networks in the case of class imbalance.
Proceedings of the Genetic and Evolutionary Computation Conference, 2008

2007
Genetic programming neural networks: A powerful bioinformatics tool for human genetics.
Appl. Soft Comput., 2007

Linkage Disequilibrium in Genetic Association Studies Improves the Performance of Grammatical Evolution Neural Networks.
Proceedings of the 2007 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2007

2006
GPNN: Power studies and applications of a neural network method for detecting gene-gene interactions in studies of human disease.
BMC Bioinform., 2006

Risk Factor Interactions and Genetic Effects Associated with Post-Operative Atrial Fibrillation.
Proceedings of the Biocomputing 2006, 2006

Data Simulation Software for Whole-Genome Association and Other Studies in Human Genetics.
Proceedings of the Biocomputing 2006, 2006

Alternative cross-over strategies and selection techniques for grammatical evolution optimized neural networks.
Proceedings of the Genetic and Evolutionary Computation Conference, 2006

Comparison of Neural Network Optimization Approaches for Studies of Human Genetics.
Proceedings of the Applications of Evolutionary Computing, 2006

Feature Selection using a Random Forests Classifier for the Integrated Analysis of Multiple Data Types.
Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2006

Understanding the Evolutionary Process of Grammatical Evolution Neural Networks for Feature Selection in Genetic Epidemiology.
Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2006

2005
Can Neural Network Constraints in GP Provide Power to Detect Genes Associated with Human Disease?.
Proceedings of the Applications of Evolutionary Computing, 2005


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