Alisdair R. Fernie

According to our database, Alisdair R. Fernie authored at least 10 papers between 2004 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

Multi-omics analysis of early leaf development in <i>Arabidopsis thaliana</i>.

Mohammad Amin Omidbakhshfard, Ewelina M. Sokolowska, Valerio Di Vittori, Leonardo Perez de Souza, Anastasiya Kuhalskaya, Yariv Brotman, Saleh Alseekh, Alisdair R. Fernie, Aleksandra Skirycz

Patterns, 2021

2016

iReMet-flux: constraint-based approach for integrating relative metabolite levels into a stoichiometric metabolic models.

Max Sajitz-Hermstein, Nadine Töpfer, Sabrina Kleessen, Alisdair R. Fernie, Zoran Nikoloski

Bioinform., 2016

2014

Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses.

Nadine Töpfer, Federico Scossa, Alisdair R. Fernie, Zoran Nikoloski

PLoS Comput. Biol., 2014

2012

<i>R</i>obi<i>NA</i>: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics.

Marc Lohse, Anthony M. Bolger, Axel Nagel, Alisdair R. Fernie, John E. Lunn, Mark Stitt, Björn Usadel

Nucleic Acids Res., 2012

2007

From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle.

Ralf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig

Bioinform., 2007

Integrative Analysis of Transcriptome and Metabolome Data.

Lothar Willmitzer, Camila Caldana, Alisdair R. Fernie, Patrick Giavalisco, Matthew A. Hannah, Henning Redestig, Dirk Steinhauser

Proceedings of the German Conference on Bioinformatics, 2007

2006

Metabolite profiles as a reflection of physiological status -- a methodological validation.

Matthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig

J. Integr. Bioinform., 2006

PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments.

Björn Usadel, Axel Nagel, Dirk Steinhauser, Yves Gibon, Oliver E. Bläsing, Henning Redestig, Nese Sreenivasulu, Leonard Krall, Matthew A. Hannah, Fabien Poree, Alisdair R. Fernie, Mark Stitt

BMC Bioinform., 2006

2005

[e-mail]: the Golm Metabolome Database.

Joachim Kopka, Nicolas Schauer, Stephan Krueger, Claudia Birkemeyer, Björn Usadel, Eveline Bergmüller, Peter Dörmann, Wolfram Weckwerth, Yves Gibon, Mark Stitt, Lothar Willmitzer, Alisdair R. Fernie, Dirk Steinhauser

Bioinform., 2005

2004

Metabolite fingerprinting: detecting biological features by independent component analysis.

Matthias Scholz, S. Gatzek, Alisdair R. Sterling, Oliver Fiehn, Joachim Selbig

Bioinform., 2004