Alida Palmisano

According to our database, Alida Palmisano authored at least 13 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

TPWshiny: an interactive R/Shiny app to explore cell line transcriptional responses to anti-cancer drugs.

Peter Zhang, Alida Palmisano, Ravindra Kumar, Ming-Chung Li, James H. Doroshow, Yingdong Zhao

Bioinform., 2022

2018

JigCell Model Connector: building large molecular network models from components.

Thomas C. Jones Jr, Stefan Hoops, Layne T. Watson, Alida Palmisano, John J. Tyson, Clifford A. Shaffer

Simul., 2018

2017

OpenGeneMed: a portable, flexible and customizable informatics hub for the coordination of next-generation sequencing studies in support of precision medicine trials.

Alida Palmisano, Yingdong Zhao, Ming-Chung Li, Eric C. Polley, Richard M. Simon

Briefings Bioinform., 2017

2015

JigCell Run Manager (JC-RM): a tool for managing large sets of biochemical model parametrizations.

Alida Palmisano, Stefan Hoops, Layne T. Watson, Thomas C. Jones Jr, John J. Tyson, Clifford A. Shaffer

BMC Syst. Biol., 2015

2014

Multistate Model Builder (MSMB): a flexible editor for compact biochemical models.

Alida Palmisano, Stefan Hoops, Layne T. Watson, Thomas C. Jones Jr, John J. Tyson, Clifford A. Shaffer

BMC Syst. Biol., 2014

2010

Modelling and Inference Strategies for Biological Systems.

Alida Palmisano

PhD thesis, 2010

Coding Biological Systems in a Stochastic Framework - The Case Study of Budding Yeast Cell Cycle.

Alida Palmisano

Proceedings of the BIOINFORMATICS 2010, 2010

2009

Deducing Chemical Reaction Rate Constants and Their Regions of Confidence from Noisy Measurements of Time Series of Concentration.

Paola Lecca, Alida Palmisano, Corrado Priami

Proceedings of the UKSim'11, 2009

A new probabilistic generative model of parameter inference in biochemical networks.

Paola Lecca, Alida Palmisano, Corrado Priami, Guido Sanguinetti

Proceedings of the 2009 ACM Symposium on Applied Computing (SAC), 2009

From ODES to Language-Based, Executable Models of Biological Systems.

Alida Palmisano, Ivan Mura, Corrado Priami

Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009

On the Parameter Inference in Chaotic Chemical Systems.

Paola Lecca, Alida Palmisano

Proceedings of the EMS 2009, 2009

Analyzing various models of Circadian Clock and Cell Cycle coupling.

Attila Csikász-Nagy, Adrien Fauré, Roberto Larcher, Paola Lecca, Ivan Mura, Ferenc Jordán, Alida Palmisano, Alessandro Romanel, Sean Sedwards, Heike Siebert, Sylvain Soliman, Denis Thieffry, Judit Zámborszky, Tommaso Mazza, Paolo Ballarini

Proceedings of the Formal Methods in Molecular Biology, 22.02. - 27.02.2009, 2009

2008

Studying Irreversible Transitions in a Model of Cell Cycle Regulation.

Paolo Ballarini, Tommaso Mazza, Alida Palmisano, Attila Csikász-Nagy

Proceedings of the Third International Workshop on the Practical Application of Stochastic Modelling, 2008