Ali Ebrahim
Orcid: 0000-0002-7477-504X
According to our database1,
Ali Ebrahim
authored at least 30 papers
between 2011 and 2023.
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Bibliography
2023
IET Comput. Digit. Tech., March, 2023
2022
Int. J. Embed. Real Time Commun. Syst., 2022
2021
Computation of condition-dependent proteome allocation reveals variability in the macro and micro nutrient requirements for growth.
PLoS Comput. Biol., 2021
Fast Approximation of the Top-k Items in Data Streams Using a Reconfigurable Accelerator.
Proceedings of the Applied Reconfigurable Computing. Architectures, Tools, and Applications, 2021
2020
Proceedings of the 38th IEEE International Conference on Computer Design, 2020
2019
Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen.
PLoS Comput. Biol., 2019
DynamicME: dynamic simulation and refinement of integrated models of metabolism and protein expression.
BMC Syst. Biol., 2019
2018
COBRAme: A computational framework for genome-scale models of metabolism and gene expression.
PLoS Comput. Biol., 2018
2016
PhD thesis, 2016
BiGG Models: A platform for integrating, standardizing and sharing genome-scale models.
Nucleic Acids Res., 2016
2015
Microkernel Architecture and Hardware Abstraction Layer of a Reliable Reconfigurable Real-Time Operating System (R3TOS).
ACM Trans. Reconfigurable Technol. Syst., 2015
Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways.
PLoS Comput. Biol., 2015
Proceedings of the 2015 NASA/ESA Conference on Adaptive Hardware and Systems, 2015
2014
A fast and scalable FPGA damage diagnostic service for R3TOS using BIST cloning technique.
Proceedings of the 24th International Conference on Field Programmable Logic and Applications, 2014
Proceedings of the Reconfigurable Computing: Architectures, Tools, and Applications, 2014
Proceedings of the 2014 NASA/ESA Conference on Adaptive Hardware and Systems, 2014
2013
R3TOS: A Novel Reliable Reconfigurable Real-Time Operating System for Highly Adaptive, Efficient, and Dependable Computing on FPGAs.
IEEE Trans. Computers, 2013
Runtime Scheduling, Allocation, and Execution of Real-Time Hardware Tasks onto Xilinx FPGAs Subject to Fault Occurrence.
Int. J. Reconfigurable Comput., 2013
BMC Syst. Biol., 2013
GIM<sup>3</sup>E: condition-specific models of cellular metabolism developed from metabolomics and expression data.
Bioinform., 2013
Proceedings of the 2012 International Conference on Reconfigurable Computing and FPGAs, 2013
Multiple-clone configuration of relocatable partial bitstreams in Xilinx Virtex FPGAs.
Proceedings of the 2013 NASA/ESA Conference on Adaptive Hardware and Systems, 2013
2012
Novel Dynamic Partial Reconfiguration Implementation of K-Means Clustering on FPGAs: Comparative Results with GPPs and GPUs.
Int. J. Reconfigurable Comput., 2012
Proceedings of the 22nd International Conference on Field Programmable Logic and Applications (FPL), 2012
Proceedings of the 2012 NASA/ESA Conference on Adaptive Hardware and Systems, 2012
Proceedings of the 2012 NASA/ESA Conference on Adaptive Hardware and Systems, 2012
2011
IEEE Embed. Syst. Lett., 2011
Snake: An Efficient Strategy for the Reuse of Circuitry and Partial Computation Results in High-Performance Reconfigurable Computing.
Proceedings of the 2011 International Conference on Reconfigurable Computing and FPGAs, 2011