Alexandra Lee

According to our database, Alexandra Lee authored at least 10 papers between 2015 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2022

SOPHIE: Generative Neural Networks Separate Common and Specific Transcriptional Responses.

Alexandra J. Lee, Dallas L. Mould, Jake Crawford, Dongbo Hu, Rani K. Powers, Georgia Doing, James C. Costello, Deborah A. Hogan, Casey S. Greene

Genom. Proteom. Bioinform., October, 2022

Ten quick tips for deep learning in biology.

Benjamin D. Lee, Anthony Gitter, Casey S. Greene, Sebastian Raschka, Finlay Maguire, Alexander J. Titus, Michael D. Kessler, Alexandra J. Lee, Marc G. Chevrette, Paul Allen Stewart, Thiago Britto-Borges, Evan M. Cofer, Kun-Hsing Yu, Juan Jose Carmona, Elana J. Fertig, Alexandr A. Kalinin, Brandon Signal, Benjamin J. Lengerich, Timothy J. Triche Jr., Simina M. Boca

PLoS Comput. Biol., 2022

Ten simple rules for large-scale data processing.

Arkarachai Fungtammasan, Alexandra Lee, Jaclyn N. Taroni, Kurt Wheeler, Chen-Shan Chin, Sean Davis, Casey S. Greene

PLoS Comput. Biol., 2022

2021

The Effectiveness of Interactive Visualization Techniques for Time Navigation of Dynamic Graphs on Large Displays.

Alexandra Lee, Daniel Archambault, Miguel A. Nacenta

IEEE Trans. Vis. Comput. Graph., 2021

Ten Quick Tips for Deep Learning in Biology.

Benjamin D. Lee, Anthony Gitter, Casey S. Greene, Sebastian Raschka, Finlay Maguire, Alexander J. Titus, Michael D. Kessler, Alexandra J. Lee, Marc G. Chevrette, Paul Allen Stewart, Thiago Britto-Borges, Evan M. Cofer, Kun-Hsing Yu, Juan Jose Carmona, Elana J. Fertig, Alexandr A. Kalinin, Beth Signal, Benjamin J. Lengerich, Timothy J. Triche Jr., Simina M. Boca

CoRR, 2021

2019

Dynamic Network Plaid: A Tool for the Analysis of Dynamic Networks.

Alexandra Lee, Daniel Archambault, Miguel A. Nacenta

Proceedings of the 2019 CHI Conference on Human Factors in Computing Systems, 2019

2017

Influenza Research Database: An integrated bioinformatics resource for influenza virus research.

Yun Zhang, Brian D. Aevermann, Tavis K. Anderson, David F. Burke, Gwenaelle Dauphin, Zhiping Gu, Sherry He, Sanjeev Kumar, Christopher N. Larsen, Alexandra J. Lee, Xiaomei Li, Catherine Macken, Colin Mahaffey, Brett E. Pickett, Brian Reardon, Thomas Smith, Lucy Stewart, Christian Suloway, Guangyu Sun, Lei Tong, Amy L. Vincent, Bryan Walters, Sam Zaremba, Hongtao Zhao, Liwei Zhou, Christian M. Zmasek, Edward B. Klem, Richard H. Scheuermann

Nucleic Acids Res., 2017

Cell type discovery and representation in the era of high-content single cell phenotyping.

Trygve E. Bakken, Lindsay G. Cowell, Brian D. Aevermann, Mark Novotny, Rebecca D. Hodge, Jeremy A. Miller, Alexandra Lee, Ivan Chang, Jamison M. McCorrison, Bali Pulendran, Yu Qian, Nicholas J. Schork, Roger S. Lasken, Ed S. Lein, Richard H. Scheuermann

BMC Bioinform., 2017

2016

Communities Found by Users - not Algorithms: Comparing Human and Algorithmically Generated Communities.

Alexandra Lee, Daniel Archambault

Proceedings of the 2016 CHI Conference on Human Factors in Computing Systems, 2016

2015

FlowGate: towards extensible and scalable web-based flow cytometry data analysis.

Yu Qian, Hyunsoo Kim, Shweta Purawat, Jianwu Wang, Rick Stanton, Alexandra Lee, Weijia Xu, Ilkay Altintas, Robert S. Sinkovits, Richard H. Scheuermann

Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by Enhanced Cyberinfrastructure, St. Louis, MO, USA, July 26, 2015