Alexander Sczyrba

According to our database, Alexander Sczyrba authored at least 22 papers between 2003 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Base4NFDI - Basic Services for NFDI Creating NFDI-Wide Basic Services in a World of Specific Domains.

Sonja Schimmler, Reinhard Altenhöner, Lars Bernard, Juliane Fluck, Axel Klinger, Sören Lorenz, Brigitte Mathiak, Bernhard Miller, Raphael Ritz, Thomas Schörner-Sadenius, Alexander Sczyrba, Regine Stein

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

Embedding the de.NBI Cloud in the National Research Data Infrastructure Activities.

Nils Hoffmann, Irena Maus, Sebastian Beier, Peter Belmann, Jan Krüger, Andreas Tauch, Alexander Goesmann, Roland Eils, Peer Bork, Oliver Kohlbacher, Ursula Kummer, Rolf Backofen, Ivo Buchhalter, Alexander Sczyrba

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2020

ConCysFind: a pipeline tool to predict conserved amino acids of protein sequences across the plant kingdom.

Marten Moore, Corinna Wesemann, Nikolaj Gossmann, Arne Sahm, Jan Krüger, Alexander Sczyrba, Karl-Josef Dietz

BMC Bioinform., 2020

2019

de.NBI Cloud federation through ELIXIR AAI.

Peter Belmann, Björn Fischer, Jan Krüger, Michal Procházka, Helena Rasche, Manuel Prinz, Maximilian Hanussek, Martin Lang, Felix Bartusch, Benjamin Gläßle, Jens Krüger, Alfred Pühler, Alexander Sczyrba

F1000Research, 2019

2018

Common ELIXIR Service for Researcher Authentication and Authorisation.

Mikael Linden, Michal Procházka, Ilkka Lappalainen, Dominik Bucik, Pavel Vyskocil, Martin Kuba, Sami Silén, Peter Belmann, Alexander Sczyrba, Steven J. Newhouse, Ludek Matyska, Tommi H. Nyrönen

F1000Research, 2018

Analyzing large scale genomic data on the cloud with Sparkhit.

Liren Huang, Jan Krüger, Alexander Sczyrba

Bioinform., 2018

2016

acdc - Automated Contamination Detection and Confidence estimation for single-cell genome data.

Markus Lux, Jan Krüger, Christian Rinke, Irena Maus, Andreas Schlüter, Tanja Woyke, Alexander Sczyrba, Barbara Hammer

BMC Bioinform., 2016

MeCorS: Metagenome-enabled error correction of single cell sequencing reads.

Andreas Bremges, Esther Singer, Tanja Woyke, Alexander Sczyrba

Bioinform., 2016

2015

Automatic discovery of metagenomic structure.

Markus Lux, Alexander Sczyrba, Barbara Hammer

Proceedings of the 2015 International Joint Conference on Neural Networks, 2015

2013

Nonlinear Dimensionality Reduction for Cluster Identification in Metagenomic Samples.

Andrej Gisbrecht, Barbara Hammer, Bassam Mokbel, Alexander Sczyrba

Proceedings of the 17th International Conference on Information Visualisation, 2013

2012

Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package.

Mohamed El-Kalioby, Mohamed Abouelhoda, Jan Krüger, Robert Giegerich, Alexander Sczyrba, Dennis P. Wall, Peter J. Tonellato

BMC Bioinform., 2012

2008

GeneFisher-P: variations of GeneFisher as processes in Bio-jETI.

Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen, Alexander Sczyrba, Sven Hartmeier, Robert Giegerich

BMC Bioinform., 2008

Two interactive Bioinformatics courses at the Bielefeld University Bioinformatics Server.

Alexander Sczyrba, Susanne Konermann, Robert Giegerich

Briefings Bioinform., 2008

2006

Genome analysis based on EST collections: a clustering pipeline and a database on Xenopus laevis

Alexander Sczyrba

PhD thesis, 2006

IsoSVM - Distinguishing isoforms and paralogs on the protein level.

Michael Spitzer, Stefan Lorkowski, Paul Cullen, Alexander Sczyrba, Georg Fuellen

BMC Bioinform., 2006

2004

AGenDA: gene prediction by cross-species sequence comparison.

Leila Taher, Oliver Rinner, Saurabh Garg, Alexander Sczyrba, Burkhard Morgenstern

Nucleic Acids Res., 2004

e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences.

Jan Krüger, Alexander Sczyrba, Stefan Kurtz, Robert Giegerich

Nucleic Acids Res., 2004

Genlight: Interactive high-throughput sequence analysis and comparative genomics.

Michael Beckstette, Jens T. Mailänder, Richard J. Marhöfer, Alexander Sczyrba, Enno Ohlebusch, Robert Giegerich, Paul M. Selzer

J. Integr. Bioinform., 2004

Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics.

Michael Beckstette, Alexander Sczyrba, Paul M. Selzer

Proceedings of the German Conference on Bioinformatics (GCB 2004), Bielefeld, 2004

2003

RNA-related tools on the Bielefeld Bioinformatics Server.

Alexander Sczyrba, Jan Krüger, Henning Mersch, Stefan Kurtz, Robert Giegerich

Nucleic Acids Res., 2003

AGenDA: homology-based gene prediction.

Leila Taher, Oliver Rinner, Saurabh Garg, Alexander Sczyrba, Michael Brudno, Serafim Batzoglou, Burkhard Morgenstern

Bioinform., 2003

AltAVisT: Comparing alternative multiple sequence alignments.

Burkhard Morgenstern, Sachin Goel, Alexander Sczyrba, Andreas W. M. Dress

Bioinform., 2003