Alexander R. A. Anderson

According to our database, Alexander R. A. Anderson authored at least 25 papers between 2000 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue.

Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen

Medical Image Anal., 2024

2022

Mistic: An open-source multiplexed image t-SNE viewer.

Sandhya Prabhakaran, Chandler Gatenbee, Mark Robertson-Tessi, Jeffrey West, Amer A. Beg, Jhanelle Gray, Scott Antonia, Robert A. Gatenby, Alexander R. A. Anderson

Patterns, 2022

Developing tools for analyzing and viewing multiplexed images.

Sandhya Prabhakaran, Chandler Gatenbee, Alexander R. A. Anderson

Patterns, 2022

2021

The role of memory in non-genetic inheritance and its impact on cancer treatment resistance.

Tyler Cassidy, Daniel Nichol, Mark Robertson-Tessi, Morgan Craig, Alexander R. A. Anderson

PLoS Comput. Biol., 2021

IsoMaTrix: a framework to visualize the isoclines of matrix games and quantify uncertainty in structured populations.

Jeffrey West, Yongqian Ma, Artem Kaznatcheev, Alexander R. A. Anderson

Bioinform., 2021

2020

From cells to tissue: How cell scale heterogeneity impacts glioblastoma growth and treatment response.

Jill Gallaher, Susan Christine Massey, Andrea Hawkins-Daarud, Sonal S. Noticewala, Russell C. Rockne, Sandra K. Johnston, Luis Gonzalez-Cuyar, Joseph Juliano, Orlando Gil, Kristin R. Swanson, Peter D. Canoll, Alexander R. A. Anderson

PLoS Comput. Biol., 2020

Hybrid Automata Library: A flexible platform for hybrid modeling with real-time visualization.

Rafael R. Bravo, Etienne Baratchart, Jeffrey West, Ryan O. Schenck, Anna K. Miller, Jill Gallaher, Chandler Gatenbee, David Basanta, Mark Robertson-Tessi, Alexander R. A. Anderson

PLoS Comput. Biol., 2020

2019

Clonal hematopoiesis of indeterminate potential and its impact on patient trajectories after stem cell transplantation.

Derek S. Park, Afua Abrafi Boakye, David E. Muench, H. Leighton Grimes, Pearlie K. Epling-Burnette, Philip K. Maini, Alexander R. A. Anderson, Michael B. Bonsall

PLoS Comput. Biol., 2019

NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline.

Ryan O. Schenck, Eszter Lakatos, Chandler Gatenbee, Trevor A. Graham, Alexander R. A. Anderson

BMC Bioinform., 2019

EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data.

Chandler Gatenbee, Ryan O. Schenck, Rafael R. Bravo, Alexander R. A. Anderson

BMC Bioinform., 2019

2017

Stem Cell Plasticity and Niche Dynamics in Cancer Progression.

Noemi Picco, Robert A. Gatenby, Alexander R. A. Anderson

IEEE Trans. Biomed. Eng., 2017

The Influence of Cellular Characteristics on the Evolution of Shape Homeostasis.

Philip Gerlee, David Basanta, Alexander R. A. Anderson

Artif. Life, 2017

2016

Spatial Metrics of Tumour Vascular Organisation Predict Radiation Efficacy in a Computational Model.

Jacob G. Scott, Alexander G. Fletcher, Alexander R. A. Anderson, Philip K. Maini

PLoS Comput. Biol., 2016

2015

Steering Evolution with Sequential Therapy to Prevent the Emergence of Bacterial Antibiotic Resistance.

Daniel Nichol, Peter Jeavons, Alexander G. Fletcher, Robert A. Bonomo, Philip K. Maini, Jerome L. Paul, Robert A. Gatenby, Alexander R. A. Anderson, Jacob G. Scott

PLoS Comput. Biol., 2015

2014

Microenvironmental Variables Must Influence Intrinsic Phenotypic Parameters of Cancer Stem Cells to Affect Tumourigenicity.

Jacob G. Scott, Anita B. Hjelmeland, Prakash Chinnaiyan, Alexander R. A. Anderson, David Basanta

PLoS Comput. Biol., 2014

2013

Intrinsic cell factors that influence tumourigenicity in cancer stem cells - towards hallmarks of cancer stem cells

Jacob G. Scott, Prakash Chinnaiyan, Alexander R. A. Anderson, Anita B. Hjelmeland, David Basanta

CoRR, 2013

2010

Linking Changes in Epithelial Morphogenesis to Cancer Mutations Using Computational Modeling.

Katarzyna A. Rejniak, Shizhen E. Wang, Nicole S. Bryce, Hang Chang, Bahram Parvin, Jerome Jourquin, Lourdes Estrada, Joe W. Gray, Carlos L. Arteaga, Alissa M. Weaver, Vito Quaranta, Alexander R. A. Anderson

PLoS Comput. Biol., 2010

Evolving Homeostatic Tissue Using Genetic Algorithms.

Philip Gerlee, David Basanta, Alexander R. A. Anderson

Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010

2009

Modelling evolutionary cell behaviour using neural networks: Application to tumour growth.

Philip Gerlee, Alexander R. A. Anderson

Biosyst., 2009

2008

Mathematical modelling of cancer cell invasion of tissue.

Ignacio Ramis-Conde, Mark A. J. Chaplain, Alexander R. A. Anderson

Math. Comput. Model., 2008

The gene-function relationship in the metabolism of yeast and digital organisms.

Philip Gerlee, Torbjörn Lundh, Bing Zhang, Alexander R. A. Anderson

Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

2006

Computational Methods and Results for Structured Multiscale Models of Tumor Invasion.

Bruce P. Ayati, Glenn F. Webb, Alexander R. A. Anderson

Multiscale Model. Simul., 2006

Mathematical modelling of the influence of blood rheological properties upon adaptative tumour-induced angiogenesis.

Angélique Stéphanou, Steven R. McDougall, Alexander R. A. Anderson, Mark A. J. Chaplain

Math. Comput. Model., 2006

2005

Mathematical modelling of flow in 2D and 3D vascular networks: Applications to anti-angiogenic and chemotherapeutic drug strategies.

Angélique Stéphanou, Steven R. McDougall, Alexander R. A. Anderson, Mark A. J. Chaplain

Math. Comput. Model., 2005

2000

Steady-state solutions of a generic model for the formation of capillary networks.

Fordyce A. Davidson, Alexander R. A. Anderson, Mark A. J. Chaplain

Appl. Math. Lett., 2000