Alexander Junge

According to our database, Alexander Junge authored at least 9 papers between 2014 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Automated Medical Coding on MIMIC-III and MIMIC-IV: A Critical Review and Replicability Study.

Joakim Edin, Alexander Junge, Jakob D. Havtorn, Lasse Borgholt, Maria Maistro, Tuukka Ruotsalo, Lars Maaløe

Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2023

2022

Diseases 2.0: a weekly updated database of disease-gene associations from text mining and data integration.

Dhouha Grissa, Alexander Junge, Tudor I. Oprea, Lars Juhl Jensen

Database J. Biol. Databases Curation, 2022

2020

CoCoScore: context-aware co-occurrence scoring for text mining applications using distant supervision.

Alexander Junge, Lars Juhl Jensen

Bioinform., 2020

2019

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.

Damian Szklarczyk, Annika L. Gable, David Lyon, Alexander Junge, Stefan Wyder, Jaime Huerta-Cepas, Milan Simonovic, Nadezhda T. Doncheva, John H. Morris, Peer Bork, Lars Juhl Jensen, Christian von Mering

Nucleic Acids Res., 2019

2017

RNAscClust: clustering RNA sequences using structure conservation and graph based motifs.

Milad Miladi, Alexander Junge, Fabrizio Costa, Stefan E. Seemann, Jakob Hull Havgaard, Jan Gorodkin, Rolf Backofen

Bioinform., 2017

RAIN: RNA-protein Association and Interaction Networks.

Alexander Junge, Jan C. Refsgaard, Christian Garde, Xiaoyong Pan, Alberto Santos, Ferhat Alkan, Christian Anthon, Christian von Mering, Christopher T. Workman, Lars Juhl Jensen, Jan Gorodkin

Database J. Biol. Databases Curation, 2017

2016

Highlights from the 11th ISCB Student Council Symposium 2015: Dublin, Ireland. 10 July 2015.

Katie Wilkins, Mehedi Hassan, Margherita Francescatto, Jakob B. Jespersen, R. Gonzalo Parra, Bart Cuypers, Dan F. DeBlasio, Alexander Junge, Anupama Jigisha, Farzana Rahman, Griet Laenen, Sander Willems, Lieven Thorrez, Yves Moreau, Nagarajan Raju, Sonia P. Chothani, C. Ramakrishnan, Masakazu Sekijima, M. Michael Gromiha, Paddy J. Slator, Nigel J. Burroughs, Przemyslaw Szalaj, Zhonghui Tang, Paul J. Michalski, Oskar Luo, Xingwang Li, Yijun Ruan, Dariusz Plewczynski, Giulia Fiscon, Emanuel Weitschek, Massimo Ciccozzi, Paola Bertolazzi, Giovanni Felici, Pieter Meysman, Manu Vanaerschot, Maya Berg, Hideo Imamura, Jean-Claude Dujardin, Kris Laukens, Westa Domanova, James R. Krycer, Rima Chaudhuri, Pengyi Yang, Fatemeh Vafaee, Daniel J. Fazakerley, Sean J. Humphrey, David E. James, Zdenka Kuncic

BMC Bioinform., February, 2016

2015

Highlights from the tenth ISCB Student Council Symposium 2014.

Farzana Rahman, Katie Wilkins, Annika Jacobsen, Alexander Junge, Esmeralda Vicedo, Dan F. DeBlasio, Anupama Jigisha, Tomás Di Domenico

BMC Bioinform., 2015

2014

KeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape.

Nicolas Alcaraz, Josch Pauling, Richa Batra, Eudes Barbosa, Alexander Junge, Anne Christensen, Vasco Ariston de Carvalho Azevedo, Henrik J. Ditzel, Jan Baumbach

BMC Syst. Biol., 2014