Alex H. Wagner

According to our database, Alex H. Wagner authored at least 9 papers between 2011 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of two.

2023

CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase.

Kilannin Krysiak, Arpad M. Danos, Jason Saliba, Joshua F. McMichael, Adam C. Coffman, Susanna Kiwala, Erica K. Barnell, Lana Sheta, Cameron J. Grisdale, Lynzey Kujan, Shahil Pema, Jake Lever, Sarah Ridd, Nicholas C. Spies, Veronica Andric, Andreea Chiorean, Damian Tobias Rieke, Kaitlin A. Clark, Caralyn Reisle, Ajay C. Venigalla, Mark Evans, Payal Jani, Hideaki Takahashi, Avila Suda, Peter Horák, Deborah i Ritter, Xin Zhou, Benjamin J. Ainscough, Sean Delong, Chimene Kesserwan, Mario Lamping, Haolin Shen, Alex Marr, My Hoang, Kartik Singhal, Mariam Khanfar, Brian V. Li, Wan-Hsin Lin, Panieh Terraf, Laura B. Corson, Yasser Salama, Katie M. Campbell, Kirsten M. Farncombe, Jianling Ji, Xiaonan Zhao, Xinjie Xu, Rashmi Kanagal-Shamanna, Ian King, Kelsy C. Cotto, Zachary L. Skidmore, Jason R. Walker, Jinghui Zhang, Aleksandar Milosavljevic, Ronak Y. Patel, Rachel H. Giles, Raymond H. Kim, Lynn M. Schriml, Elaine R. Mardis, Steven J. M. Jones, Gordana Raca, Shruti Rao, Subha Madhavan, Alex H. Wagner, Malachi Griffith, Obi L. Griffith

Nucleic Acids Res., January, 2023

2022

Leveraging a pharmacogenomics knowledgebase to formulate a drug response phenotype terminology for genomic medicine.

Yiqing Zhao, Matthew Brush, Chen Wang, Alex H. Wagner, Hongfang Liu, Robert R. Freimuth

Bioinform., November, 2022

A Simple Standard for Sharing Ontological Mappings (SSSOM).

Nicolas Matentzoglu, James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew H. Brush, Tiffany J. Callahan, Christopher G. Chute, William D. Duncan, Chris T. A. Evelo, Davera Gabriel, John Graybeal, Alasdair J. G. Gray, Benjamin M. Gyori, Melissa A. Haendel, Henriette Harmse, Nomi L. Harris, Ian Harrow, Harshad Hegde, Amelia L. Hoyt, Charles Tapley Hoyt, Dazhi Jiao, Ernesto Jiménez-Ruiz, Simon Jupp, Hyeongsik Kim, Sebastian Köhler, Thomas Liener, Qinqin Long, James Malone, James A. McLaughlin, Julie A. McMurry, Sierra A. T. Moxon, Monica C. Munoz-Torres, David Osumi-Sutherland, James A. Overton, Bjoern Peters, Tim E. Putman, Núria Queralt-Rosinach, Kent A. Shefchek, Harold Solbrig, Anne E. Thessen, Tania Tudorache, Nicole A. Vasilevsky, Alex H. Wagner, Christopher J. Mungall

Database J. Biol. Databases Curation, 2022

2021

Integration of the Drug-Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts.

Sharon L. Freshour, Susanna Kiwala, Kelsy C. Cotto, Adam C. Coffman, Joshua F. McMichael, Jonathan J. Song, Malachi Griffith, Obi L. Griffith, Alex H. Wagner

Nucleic Acids Res., 2021

The GA4GH Variation Representation Specification (VRS): a Computational Framework for the Precise Representation of Molecular Variation.

Alex H. Wagner, Lawrence J. Babb, Melissa S. Cline, Helen Schuilenburg, Tristan Nelson, Robert R. Freimuth, Reece Hart

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020

Global research consortia and data harmonization projects drive the clinical interpretation of cancers.

Justin Guinney, Subha Madhavan, Melissa A. Haendel, Alex H. Wagner, Ratna R. Thangudu

Proceedings of the AMIA 2020, 2020

2016

DGIdb 2.0: mining clinically relevant drug-gene interactions.

Alex H. Wagner, Adam C. Coffman, Benjamin J. Ainscough, Nicholas C. Spies, Zachary L. Skidmore, Katie M. Campbell, Kilannin Krysiak, Deng Pan, Joshua F. McMichael, James M. Eldred, Jason R. Walker, Richard K. Wilson, Elaine R. Mardis, Malachi Griffith, Obi L. Griffith

Nucleic Acids Res., 2016

GenVisR: Genomic Visualizations in R.

Zachary L. Skidmore, Alex H. Wagner, Robert Lesurf, Katie M. Campbell, Jason Kunisaki, Obi L. Griffith, Malachi Griffith

Bioinform., 2016

2011

Sequencing and disease variation detection tools and techniques.

Adam P. DeLuca, Alex H. Wagner, Kyle R. Taylor, Ben Faga, David Thole, Val C. Sheffield, Edwin M. Stone, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun

Proceedings of the 9th IEEE/ACS International Conference on Computer Systems and Applications, 2011