Aleksandar Stojmirovic

According to our database, Aleksandar Stojmirovic authored at least 16 papers between 2006 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Automatic estimation of ulcerative colitis severity from endoscopy videos using ordinal multi-instance learning.

Evan Schwab, Gabriela Oana Cula, Kristopher Standish, Stephen S. F. Yip, Aleksandar Stojmirovic, Louis Ghanem, Christel Chehoud

Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2022

2015

Log-odds sequence logos.

Yi-Kuo Yu, John A. Capra, Aleksandar Stojmirovic, David Landsman, Stephen F. Altschul

Bioinform., 2015

Topology-function conservation in protein-protein interaction networks.

Darren Davis, Ömer Nebil Yaveroglu, Noël Malod-Dognin, Aleksandar Stojmirovic, Natasa Przulj

Bioinform., 2015

2013

PFMFind: A System for Discovery of Peptide Homology and Function.

Aleksandar Stojmirovic, Peter Andreae, Mike Boland, Thomas William Jordan, Vladimir Pestov

Proceedings of the Similarity Search and Applications - 6th International Conference, 2013

2012

Information Flow in Interaction Networks II: Channels, Path Lengths, and Potentials.

Aleksandar Stojmirovic, Yi-Kuo Yu

J. Comput. Biol., 2012

CytoSaddleSum: a functional enrichment analysis plugin for Cytoscape based on sum-of-weights scores.

Aleksandar Stojmirovic, Alexander Bliskovsky, Yi-Kuo Yu

Bioinform., 2012

2011

CytoITMprobe: a network information flow plugin for Cytoscape

Aleksandar Stojmirovic, Alexander Bliskovsky, Yi-Kuo Yu

CoRR, 2011

ppiTrim: constructing non-redundant and up-to-date interactomes.

Aleksandar Stojmirovic, Yi-Kuo Yu

Database J. Biol. Databases Curation, 2011

2010

Robust and accurate data enrichment statistics via distribution function of sum of weights.

Aleksandar Stojmirovic, Yi-Kuo Yu

Bioinform., 2010

2009

Geometric Aspects of Biological Sequence Comparison.

Aleksandar Stojmirovic, Yi-Kuo Yu

J. Comput. Biol., 2009

ITM Probe: analyzing information flow in protein networks.

Aleksandar Stojmirovic, Yi-Kuo Yu

Bioinform., 2009

2008

Quasi-metrics, Similarities and Searches: aspects of geometry of protein datasets

Aleksandar Stojmirovic

CoRR, 2008

The effectiveness of position- and composition-specific gap costs for protein similarity searches.

Aleksandar Stojmirovic, E. Michael Gertz, Stephen F. Altschul, Yi-Kuo Yu

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2007

Information Flow in Interaction Networks.

Aleksandar Stojmirovic, Yi-Kuo Yu

J. Comput. Biol., 2007

Indexing schemes for similarity search in datasets of short protein fragments.

Aleksandar Stojmirovic, Vladimir Pestov

Inf. Syst., 2007

2006

Indexing Schemes for Similarity Search: an Illustrated Paradigm.

Vladimir Pestov, Aleksandar Stojmirovic

Fundam. Informaticae, 2006