Alberto Zeni

According to our database, Alberto Zeni authored at least 14 papers between 2019 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Starlight: A kernel optimizer for GPU processing.

Alberto Zeni, Emanuele Del Sozzo, Eleonora D'Arnese, Davide Conficconi, Marco D. Santambrogio

J. Parallel Distributed Comput., May, 2024

Leveraging Difference Recurrence Relations for High-Performance GPU Genome Alignment.

Alberto Zeni, Seth Onken, Marco Domenico Santambrogio, Mehrzad Samadi

Proceedings of the 2024 International Conference on Parallel Architectures and Compilation Techniques, 2024

2023

Pushing the Level of Abstraction of Digital System Design: A Survey on How to Program FPGAs.

Emanuele Del Sozzo, Davide Conficconi, Alberto Zeni, Mirko Salaris, Donatella Sciuto, Marco D. Santambrogio

ACM Comput. Surv., 2023

On the Genome Sequence Alignment FPGA Acceleration via KSW2z.

Alberto Zeni, Guido Walter Di Donato, Alessia Della Valle, Filippo Carloni, Marco D. Santambrogio

Proceedings of the IEEE International Symposium on Circuits and Systems, 2023

New Solution For a (Scaff)Old Problem: an FPGA Approach.

Alberto Zeni, Emanuele Del Sozzo, Beatrice Branchini, Lorenzo Di Tucci, Marco D. Santambrogio

Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2023

TSUNAMI: A GPU Implementation of the WFA Algorithm.

Giulia Gerometta, Alberto Zeni, Marco D. Santambrogio

Proceedings of the 32nd International Conference on Parallel Architectures and Compilation Techniques, 2023

2022

Surfing the Wavefront of Genome Alignment.

Beatrice Branchini, Giulia Gerometta, Luisa Cicolini, Alberto Zeni, Emanuele Del Sozzo, Marco D. Santambrogio

Proceedings of the IEEE International Symposium on Circuits and Systems, 2022

Fast Genome Analysis Leveraging Exact String Matching.

Beatrice Branchini, Sofia Breschi, Alberto Zeni, Marco D. Santambrogio

Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2022

2021

The Importance of Being X-Drop: High Performance Genome Alignment on Reconfigurable Hardware.

Alberto Zeni, Guido Walter Di Donato, Lorenzo Di Tucci, Marco Rabozzi, Marco D. Santambrogio

Proceedings of the 29th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2021

Optimized Implementation of the HPCG Benchmark on Reconfigurable Hardware.

Alberto Zeni, Kenneth O'Brien, Michaela Blott, Marco D. Santambrogio

Proceedings of the Euro-Par 2021: Parallel Processing, 2021

2020

LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment.

Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick

Proceedings of the 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS), 2020

Leveraging Succinct Data Structures for DNA Sequence Mapping on FPGA.

Guido Walter Di Donato, Alberto Zeni, Lorenzo Di Tucci, Marco D. Santambrogio

Proceedings of the 2020 IEEE International Parallel and Distributed Processing Symposium Workshops, 2020

2019

An FPGA-Based Computing Infrastructure Tailored to Efficiently Scaffold Genome Sequences.

Alberto Zeni, Matteo Crespi, Lorenzo Di Tucci, Marco D. Santambrogio

Proceedings of the 27th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2019

circFA: a FPGA-based circular RNA aligner.

Alberto Zeni, Francesco Peverelli, Enrico Cabri, Lorenzo Di Tucci, Luca Cerina, Marco D. Santambrogio

Proceedings of the 2019 IEEE EMBS International Conference on Biomedical & Health Informatics, 2019