Alberto Santamaría-Pang

According to our database, Alberto Santamaría-Pang authored at least 35 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

MedImageInsight: An Open-Source Embedding Model for General Domain Medical Imaging.

Noel C. F. Codella, Ying Jin, Shrey Jain, Yu Gu, Ho Hin Lee, Asma Ben Abacha, Alberto Santamaría-Pang, Will Guyman, Naiteek Sangani, Sheng Zhang, Hoifung Poon, Stephanie Hyland, Shruthi Bannur, Javier Alvarez-Valle, Xue Li, John Garrett, Alan McMillan, Gaurav Rajguru, Madhu Maddi, Nilesh Vijayrania, Rehaan Bhimai, Nick Mecklenburg, Rupal Jain, Daniel Holstein, Naveen Gaur, Vijay Aski, Jenq-Neng Hwang, Thomas Lin, Ivan Tarapov, Matthew P. Lungren, Mu Wei

CoRR, 2024

Emergent Language Symbolic Autoencoder (ELSA) with Weak Supervision to Model Hierarchical Brain Networks.

Ammar Ahmed Pallikonda Latheef, Alberto Santamaría-Pang, Craig K. Jones, Haris I. Sair

CoRR, 2024

Foundation Models for Biomedical Image Segmentation: A Survey.

Ho Hin Lee, Yu Gu, Theodore Zhao, Yanbo Xu, Jianwei Yang, Naoto Usuyama, Cliff Wong, Mu Wei, Bennett A. Landman, Yuankai Huo, Alberto Santamaría-Pang, Hoifung Poon

CoRR, 2024

Atlas-Based Labeling of Resting-State fMRI.

Hrishikesh Kambli, Alberto Santamaría-Pang, Ivan Tarapov, Elham Beheshtian, Licia P. Luna, Haris I. Sair, Craig K. Jones

Brain Connect., 2024

2023

3D-MIR: A Benchmark and Empirical Study on 3D Medical Image Retrieval in Radiology.

Asma Ben Abacha, Alberto Santamaría-Pang, Ho Hin Lee, Jameson Merkow, Qin Cai, Surya Teja Devarakonda, Abdullah Islam, Julia Gong, Matthew P. Lungren, Thomas Lin, Noel C. F. Codella, Ivan Tarapov

CoRR, 2023

Region-based Contrastive Pretraining for Medical Image Retrieval with Anatomic Query.

Ho Hin Lee, Alberto Santamaría-Pang, Jameson Merkow, Ozan Oktay, Fernando Pérez-García, Javier Alvarez-Valle, Ivan Tarapov

CoRR, 2023

Deep Labeling of fMRI Brain Networks.

Ammar Ahmed Pallikonda Latheef, Sejal Ghate, Zhipeng Hui, Alberto Santamaría-Pang, Ivan Tarapov, Haris I. Sair, Craig K. Jones

CoRR, 2023

2022

Deep Labeling of fMRI Brain Networks Using Cloud Based Processing.

Sejal Ghate, Alberto Santamaría-Pang, Ivan Tarapov, Haris I. Sair, Craig K. Jones

Proceedings of the Advances in Visual Computing - 17th International Symposium, 2022

2021

Adversarial Attacks with Time-Scale Representations.

Alberto Santamaría-Pang, Jianwei Qiu, Aritra Chowdhury, James Kubricht, Peter H. Tu, Naresh Iyer, Nurali Virani

CoRR, 2021

Emergent Symbolic Language Based Deep Medical Image Classification.

Aritra Chowdhury, Alberto Santamaría-Pang, James R. Kubricht, Peter H. Tu

Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

2020

Emergent Languages from Pretrained Embeddings Characterize Latent Concepts in Dynamic Imagery.

James R. Kubricht, Alberto Santamaría-Pang, Chinmaya Devaraj, Aritra Chowdhury, Peter H. Tu

Int. J. Semantic Comput., 2020

Symbolic Semantic Segmentation and Interpretation of COVID-19 Lung Infections in Chest CT volumes based on Emergent Languages.

Aritra Chowdhury, Alberto Santamaría-Pang, James R. Kubricht, Jianwei Qiu, Peter H. Tu

CoRR, 2020

Towards Emergent Language Symbolic Semantic Segmentation and Model Interpretability.

Alberto Santamaría-Pang, James Kubricht, Aritra Chowdhury, Chitresh Bhushan, Peter H. Tu

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Escell: Emergent Symbolic Cellular Language.

Aritra Chowdhury, James R. Kubricht, Anup Sood, Peter H. Tu, Alberto Santamaría-Pang

Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

From Symbols to Signals: Symbolic Variational Autoencoders.

Chinmaya Devaraj, Aritra Chowdhury, Arpit Jain, James R. Kubricht, Peter H. Tu, Alberto Santamaría-Pang

Proceedings of the 2020 IEEE International Conference on Acoustics, 2020

2019

Automated Phenotyping via Cell Auto Training (CAT) on the Cell DIVE Platform.

Alberto Santamaría-Pang, Anup Sood, Dan E. Meyer, Aritra Chowdhury, Fiona Ginty

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

A Learning Approach to Interactive Advertising.

Peter H. Tu, Donald Hamilton, Tao Gao, Alex Chen, Justin Foehner, Alberto Santamaría-Pang, James Kubricht

Proceedings of the 16th IEEE International Conference on Advanced Video and Signal Based Surveillance, 2019

Towards Semantic Action Analysis via Emergent Language.

Alberto Santamaría-Pang, James R. Kubricht, Chinmaya Devaraj, Aritra Chowdhury, Peter H. Tu

Proceedings of the 2019 IEEE International Conference on Artificial Intelligence and Virtual Reality, 2019

2017

A computational study on convolutional feature combination strategies for grade classification in colon cancer using fluorescence microscopy data.

Aritra Chowdhury, Christopher J. Sevinsky, Alberto Santamaría-Pang, Bülent Yener

Proceedings of the Medical Imaging 2017: Digital Pathology, 2017

Blood vessel characterization using virtual 3D models and convolutional neural networks in fluorescence microscopy.

Aritra Chowdhury, Dmitry V. Dylov, Qing Li, Michael MacDonald, Dan E. Meyer, Michael Marino, Alberto Santamaría-Pang

Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

Robust single cell quantification of immune cell subtypes in histological samples.

Alberto Santamaría-Pang, Raghav K. Padmanabhan, Anup Sood, Michael J. Gerdes, Christopher Sevinsky, Qing Li, Nicole LaPlante, Fiona Ginty

Proceedings of the 2017 IEEE EMBS International Conference on Biomedical & Health Informatics, 2017

2016

Multi-channel algorithm for segmentation of tumor blood vessels using multiplexed image data.

Yousef Al-Kofahi, Christopher Sevinsky, Alberto Santamaría-Pang, Fiona Ginty, Anup Sood, Qing Li

Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

2015

Automatic Morphological Reconstruction of Neurons from Multiphoton and Confocal Microscopy Images Using 3D Tubular Models.

Alberto Santamaría-Pang, Paul Hernandez-Herrera, Manos Papadakis, Peter Saggau, Ioannis A. Kakadiaris

Neuroinformatics, 2015

Cell segmentation and classification by hierarchical supervised shape ranking.

Alberto Santamaría-Pang, Jens Rittscher, Michael J. Gerdes, Dirk Ryan Padfield

Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

2014

Mapping for tissue based cytometry.

Jens Rittscher, Alberto Santamaría-Pang

Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

2013

Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue.

Michael J. Gerdes, Christopher J. Sevinsky, Anup Sood, Sudeshna Adak, Musodiq O. Bello, Alexander Bordwell, Ali Can, Alex Corwin, Sean Dinn, Robert Filkins, Denise Hollman, Vidya Kamath, Sireesha Kaanumalle, Kevin B. Kenny, Melinda Larsen, Michael Lazare, Qing Li, Christina Lowes, Colin C. McCulloch, Elizabeth McDonough, Michael Montalto, Zhengyu Pang, Jens Rittscher, Alberto Santamaría-Pang, Brion D. Sarachan, Maximilian L. Seel, Antti Seppo, Kashan Shaikh, Yunxia Sui, Jingyu Zhang, Fiona Ginty

Proc. Natl. Acad. Sci. USA, 2013

Cell segmentation and classification via unsupervised shape ranking.

Alberto Santamaría-Pang, Yuchi Huang, Jens Rittscher

Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

2012

Tissue segmentation and classification using graph-based unsupervised clustering.

Daniel Margolis, Alberto Santamaría-Pang, Jens Rittscher

Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2010

Functional Morphology Analysis of the Left Anterior Descending Coronary Artery in EBCT Images.

Ioannis A. Kakadiaris, Alberto Santamaría-Pang, Amol Pednekar

IEEE Trans. Biomed. Eng., 2010

Automated liver lesion characterization using fast kVp switching dual energy computed tomography imaging.

Alberto Santamaría-Pang, Sandeep Dutta, Sokratis Makrogiannis, Amy K. Hara, William Pavlicek, Alvin C. Silva, Brian Thomsen, Scott Robertson, Darin Okerlund, David A. Langan, Rahul Bhotika

Proceedings of the Medical Imaging 2010: Computer-Aided Diagnosis, San Diego, 2010

2008

Denoising for 3-D Photon-Limited Imaging Data Using Nonseparable Filterbanks.

Alberto Santamaría-Pang, Teodor Stefan Bildea, Tan Shan, Ioannis A. Kakadiaris

IEEE Trans. Image Process., 2008

2007

Automatic Centerline Extraction of Irregular Tubular Structures Using Probability Volumes from Multiphoton Imaging.

Alberto Santamaría-Pang, Costa M. Colbert, Peter Saggau, Ioannis A. Kakadiaris

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

2006

Adaptive Frames-Based Denoising of Confocal Microscopy Data.

Alberto Santamaría-Pang, Teodor Stefan Bildea, Ioannis Konstantinidis, Ioannis A. Kakadiaris

Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

Automatic Reconstruction of Dendrite Morphology from Optical Section Stacks.

S. Urban, Sean M. O'Malley, B. Walsh, Alberto Santamaría-Pang, Peter Saggau, Costa M. Colbert, Ioannis A. Kakadiaris

Proceedings of the Computer Vision Approaches to Medical Image Analysis, 2006

2004

Three-Dimensional Shape-Motion Analysis of the Left Anterior Descending Coronary Artery in EBCT Images.

Ioannis A. Kakadiaris, Amol Pednekar, Alberto Santamaría-Pang

Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004