Alan Christoffels

According to our database, Alan Christoffels authored at least 17 papers between 2001 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Publisher Correction: Increasing the presence of BIPOC researchers in computational science.

Christine Yifeng Chen, Alan Christoffels, Roger Dube, Kamuela Enos, Juan E. Gilbert, Sanmi Koyejo, Jason Leigh, Carlo Liquido, Amy McKee, Kari Noe, Tai-Quan Peng, Karaitiana Taiuru

Nat. Comput. Sci., October, 2024

Increasing the presence of BIPOC researchers in computational science.

Christine Yifeng Chen, Alan Christoffels, Roger Dube, Kamuela Enos, Juan E. Gilbert, Sanmi Koyejo, Jason Leigh, Carlo Liquido, Amy McKee, Kari Noe, Tai-Quan Peng, Karaitiana Taiuru

Nat. Comput. Sci., September, 2024

2020

COMBAT-TB-NeoDB: fostering tuberculosis research through integrative analysis using graph database technologies.

Thoba Lose, Peter van Heusden, Alan Christoffels

Bioinform., 2020

2019

Genome Annotation: Perspective From Bacterial Genomes.

Alan Christoffels, Peter van Heusden

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

2018

Prediction of human-Bacillus anthracis protein-protein interactions using multi-layer neural network.

Ibrahim Ahmed, Peter J. Witbooi, Alan Christoffels

Bioinform., 2018

2016

The Development of Computational Biology in South Africa: Successes Achieved and Lessons Learnt.

Nicola J. Mulder, Alan Christoffels, Tulio de Oliveira, Junaid Gamieldien, Scott Hazelhurst, Fourie Joubert, Judit Kumuthini, Ché S. Pillay, Jacky L. Snoep, Özlem Tastan Bishop, Nicki Tiffin

PLoS Comput. Biol., 2016

Identification of phenotype-relevant differentially expressed genes in breast cancer demonstrates enhanced quantile discretization protocol's utility in multi-platform microarray data integration.

Darlington S. Mapiye, Alan Christoffels, Junaid Gamieldien

J. Bioinform. Comput. Biol., 2016

SNiPhunter: A SNP-Based Search Engine.

Werner Pieter Veldsman, Alan Christoffels

Data, 2016

Resistance related metabolic pathways for drug target identification in <i>Mycobacterium tuberculosis</i>.

Ruben Cloete, Ekow Oppon, Edwin Murungi, Wolf-Dieter Schubert, Alan Christoffels

BMC Bioinform., 2016

2015

Inferring bona fide transfrags in RNA-Seq derived-transcriptome assemblies of non-model organisms.

Stanley Mbandi, Uljana Hesse, Peter van Heusden, Alan Christoffels

BMC Bioinform., 2015

2012

DAMPD: a manually curated antimicrobial peptide database.

Vijayaraghava Seshadri Sundararajan, Musa Nur Gabere, Ashley Pretorius, Saleem Adam, Alan Christoffels, Minna Lehväslaiho, John A. C. Archer, Vladimir B. Bajic

Nucleic Acids Res., 2012

2011

DDPC: Dragon Database of Genes associated with Prostate Cancer.

Monique Maqungo, Mandeep Kaur, Samuel K. Kwofie, Aleksandar Radovanovic, Ulf Schaefer, Sebastian Schmeier, Ekow Oppon, Alan Christoffels, Vladimir B. Bajic

Nucleic Acids Res., 2011

2009

Database for exploration of functional context of genes implicated in ovarian cancer.

Mandeep Kaur, Aleksandar Radovanovic, Magbubah Essack, Ulf Schaefer, Monique Maqungo, Tracey Kibler, Sebastian Schmeier, Alan Christoffels, Kothandaraman Narasimhan, Mahesh Choolani, Vladimir B. Bajic

Nucleic Acids Res., 2009

2006

Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome.

Alan Christoffels, Richard Bartfai, Hamsa Srinivasan, Hans Komen, Laszlo Orban

BMC Bioinform., 2006

2005

Comparison of core promoters in Fugu rubripes and human.

Sin Lam Tan, Vidhu Choudhary, Alan Christoffels, Byrappa Venkatesh, Vladimir B. Bajic

Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005

2002

Assessment of the parallelization approach of d2_cluster for high-performance sequence clustering.

John E. Carpenter, Alan Christoffels, Yael Weinbach, Winston A. Hide

J. Comput. Chem., 2002

2001

STACK: Sequence Tag Alignment and Consensus Knowledgebase.

Alan Christoffels, Antoine van Gelder, Gary Greyling, Robert Miller, Tania Hide, Winston A. Hide

Nucleic Acids Res., 2001