Age K. Smilde

According to our database, Age K. Smilde authored at least 32 papers between 1998 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Analyzing postprandial metabolomics data using multiway models: a simulation study.

Lu Li, Shi Yan, Barbara M. Bakker, Huub C. J. Hoefsloot, Bo Chawes, David Horner, Morten A. Rasmussen, Age K. Smilde, Evrim Acar

BMC Bioinform., December, 2024

2023

Unsupervised EHR-based phenotyping via matrix and tensor decompositions.

Florian Becker, Age K. Smilde, Evrim Acar

WIREs Data. Mining. Knowl. Discov., 2023

Analysis of high-dimensional metabolomics data with complex temporal dynamics using RM-ASCA+.

Balázs Erdos, Johan A. Westerhuis, Michiel E. Adriaens, Shauna D. O'Donovan, Ren Xie, Cécile M. Singh-Povel, Age K. Smilde, Ilja C. W. Arts

PLoS Comput. Biol., 2023

2022

Exploring dynamic metabolomics data with multiway data analysis: a simulation study.

Lu Li, Huub C. J. Hoefsloot, Albert A. de Graaf, Evrim Acar, Age K. Smilde

BMC Bioinform., 2022

Phenotyping of Cervical Cancer Risk Groups via Generalized Low-Rank Models Using Medical Questionnaires.

Florian Becker, Mari Nygård, Jan Nygård, Age K. Smilde, Evrim Acar

Proceedings of the Nordic Artificial Intelligence Research and Development, 2022

2021

Repeated measures ASCA+ for analysis of longitudinal intervention studies with multivariate outcome data.

Torfinn S. Madssen, Guro F. Giskeødegård, Age K. Smilde, Johan A. Westerhuis

PLoS Comput. Biol., 2021

2020

Increased comparability between RNA-Seq and microarray data by utilization of gene sets.

Frans M. van der Kloet, Jeroen Buurmans, Martijs J. Jonker, Age K. Smilde, Johan A. Westerhuis

PLoS Comput. Biol., 2020

2019

All Sparse PCA Models Are Wrong, But Some Are Useful. Part I: Computation of Scores, Residuals and Explained Variance.

J. Camacho, Age K. Smilde, Edoardo Saccenti, Johan A. Westerhuis

CoRR, 2019

Principal component analysis of binary genomics data.

Yipeng Song, Johan A. Westerhuis, Nanne Aben, Magali Michaut, Lodewyk F. A. Wessels, Age K. Smilde

Briefings Bioinform., 2019

2018

Dynamic elementary mode modelling of non-steady state flux data.

Abel Folch-Fortuny, Bas Teusink, Huub C. J. Hoefsloot, Age K. Smilde, Alberto Ferrer

BMC Syst. Biol., 2018

iTOP: inferring the topology of omics data.

Nanne Aben, Johan A. Westerhuis, Yipeng Song, Henk A. L. Kiers, Magali Michaut, Age K. Smilde, Lodewyk F. A. Wessels

Bioinform., 2018

2016

Separating common from distinctive variation.

Frans M. van der Kloet, Patricia Sebastián-León, Ana Conesa, Age K. Smilde, Johan A. Westerhuis

BMC Bioinform., 2016

2015

Data Fusion in Metabolomics Using Coupled Matrix and Tensor Factorizations.

Evrim Acar, Rasmus Bro, Age K. Smilde

Proc. IEEE, 2015

Using Petri nets for experimental design in a multi-organ elimination pathway.

Polina Reshetova, Age K. Smilde, Johan A. Westerhuis, Antoine H. C. van Kampen

Comput. Biol. Medicine, 2015

Validation and selection of ODE based systems biology models: how to arrive at more reliable decisions.

Dicle Hasdemir, Huub C. J. Hoefsloot, Age K. Smilde

BMC Syst. Biol., 2015

2014

Use of prior knowledge for the analysis of high-throughput transcriptomics and metabolomics data.

Polina Reshetova, Age K. Smilde, Antoine H. C. van Kampen, Johan A. Westerhuis

BMC Syst. Biol., 2014

How informative is your kinetic model?: using resampling methods for model invalidation.

Dicle Hasdemir, Huub C. J. Hoefsloot, Johan A. Westerhuis, Age K. Smilde

BMC Syst. Biol., 2014

2012

Generic framework for high-dimensional fixed-effects ANOVA.

Age K. Smilde, Marieke E. Timmerman, Margriet M. W. B. Hendriks, Jeroen J. Jansen, Huub C. J. Hoefsloot

Briefings Bioinform., 2012

2011

To aggregate or not to aggregate high-dimensional classifiers.

Cheng-Jian Xu, Huub C. J. Hoefsloot, Age K. Smilde

BMC Bioinform., 2011

2009

Improving the analysis of designed studies by combining statistical modelling with study design information.

Uwe Thissen, Suzan Wopereis, Sjoerd A. A. van den Berg, Ivana Bobeldijk, Robert Kleemann, Teake Kooistra, Ko Willems van Dijk, Ben van Ommen, Age K. Smilde

BMC Bioinform., 2009

Crossfit analysis: a novel method to characterize the dynamics of induced plant responses.

Jeroen J. Jansen, Nicole M. van Dam, Huub C. J. Hoefsloot, Age K. Smilde

BMC Bioinform., 2009

A structured overview of simultaneous component based data integration.

Katrijn Van Deun, Age K. Smilde, Mariët J. van der Werf, Henk A. L. Kiers, Iven Van Mechelen

BMC Bioinform., 2009

Integrating functional genomics data using maximum likelihood based simultaneous component analysis.

Robert A. van den Berg, Iven Van Mechelen, Tom F. Wilderjans, Katrijn Van Deun, Henk A. L. Kiers, Age K. Smilde

BMC Bioinform., 2009

Matrix correlations for high-dimensional data: the modified RV-coefficient.

Age K. Smilde, Henk A. L. Kiers, S. Bijlsma, C. M. Rubingh, M. J. van Erk

Bioinform., 2009

2007

A comparison of various methods for multivariate regression with highly collinear variables.

Henk A. L. Kiers, Age K. Smilde

Stat. Methods Appl., 2007

Statistical validation of megavariate effects in ASCA.

Daniel J. Vis, Johan A. Westerhuis, Age K. Smilde, Jan van der Greef

BMC Bioinform., 2007

Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA.

María José Nueda, Ana Conesa, Johan A. Westerhuis, Huub C. J. Hoefsloot, Age K. Smilde, Manuel Talón, Alberto Ferrer

Bioinform., 2007

2006

Single channel event (SCE) for managing sensor failures in MSPC.

Henk-Jan Ramaker, Eric N. M. van Sprang, Johan A. Westerhuis, Age K. Smilde

Comput. Chem. Eng., 2006

2005

ANOVA-simultaneous component analysis (ASCA): a new tool for analyzing designed metabolomics data.

Age K. Smilde, Jeroen J. Jansen, Huub C. J. Hoefsloot, Robert-Jan A. N. Lamers, Jan van der Greef, Marieke E. Timmerman

Bioinform., 2005

2004

Analysis of longitudinal metabolomics data.

Jeroen J. Jansen, Huub C. J. Hoefsloot, Hans F. M. Boelens, Jan van der Greef, Age K. Smilde

Bioinform., 2004

Multi-way Analysis with Applications in the Chemical Sciences.

Age K. Smilde, Rasmus Bro, Paul Geladi

Wiley, ISBN: 978-0-471-98691-1, 2004

1998

A multiway 3D QSAR analysis of a series of (S)-N-[(1-ethyl-2-pyrrolidinyl)methyl]-6-methoxybenzamides.

Jonas Nilsson, Evert J. Homan, Age K. Smilde, Cor J. Grol, Håkan Wikstrüm

J. Comput. Aided Mol. Des., 1998