Adrian J. Shepherd

According to our database, Adrian J. Shepherd authored at least 20 papers between 1993 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein.

Lenka Stejskal, William D. Lees, David S. Moss, Machaela Palor, Richard J. Bingham, Adrian J. Shepherd, Joe Grove

PLoS Comput. Biol., 2020

VDJbase: an adaptive immune receptor genotype and haplotype database.

Aviv Omer, Or Shemesh, Ayelet Peres, Pazit Polak, Adrian J. Shepherd, Corey T. Watson, Scott D. Boyd, Andrew M. Collins, William D. Lees, Gur Yaari

Nucleic Acids Res., 2020

OGRDB: a reference database of inferred immune receptor genes.

William D. Lees, Christian E. Busse, Martin Corcoran, Mats Ohlin, Cathrine Scheepers, Frederick A. Matsen IV, Gur Yaari, Corey T. Watson, Andrew M. Collins, Adrian J. Shepherd

Nucleic Acids Res., 2020

2019

Computational Immunogenetics.

Marta Gomez-Perosanz, Giulia Russo, Jose Luis Sanchez-Trincado Lopez, Marzio Pennisi, Pedro A. Reche, Adrian J. Shepherd, Francesco Pappalardo

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

2012

A text-mining system for extracting metabolic reactions from full-text articles.

Jan Czarnecki, Irene Nobeli, Adrian M. Smith, Adrian J. Shepherd

BMC Bioinform., 2012

2010

An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs.

Fernando García-Alcalde, Armando Blanco, Adrian J. Shepherd

BMC Bioinform., 2010

A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2.

William D. Lees, David S. Moss, Adrian J. Shepherd

Bioinform., 2010

2009

A realistic assessment of methods for extracting gene/protein interactions from free text.

Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd

BMC Bioinform., 2009

ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization.

Francesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew P. J. Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pierluigi Lollini, Kaye E. Basford, Vladimir Brusic

Briefings Bioinform., 2009

The ImmunoGrid Simulator: How to Use It.

Francesco Pappalardo, Mark D. Halling-Brown, Marzio Pennisi, Ferdinando Chiacchio, Clare Sansom, Adrian J. Shepherd, David S. Moss, Santo Motta, Vladimir Brusic

Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2009

2008

Towards a lightweight generic computational grid framework for biological research.

Mark D. Halling-Brown, David S. Moss, Adrian J. Shepherd

BMC Bioinform., 2008

2007

Benchmarking natural-language parsers for biological applications using dependency graphs.

Andrew B. Clegg, Adrian J. Shepherd

BMC Bioinform., 2007

2003

The CATH database: an extended protein family resource for structural and functional genomics.

Frances M. G. Pearl, C. F. Bennett, James E. Bray, Andrew P. Harrison, Nigel J. Martin, Adrian J. Shepherd, Ian Sillitoe, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2003

2002

PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resources.

Adrian J. Shepherd, Nigel J. Martin, Roger G. Johnson, Paul Kellam, Christine A. Orengo

Bioinform., 2002

2001

A rapid classification protocol for the CATH Domain Database to support structural genomics.

Frances M. G. Pearl, Nigel J. Martin, James E. Bray, Daniel W. A. Buchan, Andrew P. Harrison, David A. Lee, Gabrielle A. Reeves, Adrian J. Shepherd, Ian Sillitoe, Annabel E. Todd, Janet M. Thornton, Christine A. Orengo

Nucleic Acids Res., 2001

VIDA: a virus database system for the organization of animal virus genome open reading frames.

M. Mar Albà, David A. Lee, Frances M. G. Pearl, Adrian J. Shepherd, Nigel J. Martin, Christine A. Orengo, Paul Kellam

Nucleic Acids Res., 2001

1997

The New ERA in Supervised Learning.

Denise Gorse, Adrian J. Shepherd, John G. Taylor

Neural Networks, 1997

Second-order methods for neural networks - fast and reliable training methods for multi-layer perceptrons.

Adrian J. Shepherd

Perspectives in neural computing, Springer, ISBN: 978-3-540-76100-6, 1997

1995

Novel second-order techniques and global optimisation methods for supervised training of multi-layer perceptrons.

Adrian J. Shepherd

PhD thesis, 1995

1993

Traking global minima using a range expansion algorithm.

Denise Gorse, Adrian J. Shepherd, John G. Taylor

Proceedings of the 1st European Symposium on Artificial Neural Networks, 1993