Adam M. Phillippy

According to our database, Adam M. Phillippy authored at least 16 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Minmers are a generalization of minimizers that enable unbiased local Jaccard estimation.

Bryce Kille, Erik Garrison, Todd J. Treangen, Adam M. Phillippy

Bioinform., September, 2023

2022

StainedGlass: interactive visualization of massive tandem repeat structures with identity heatmaps.

Mitchell R. Vollger, Peter Kerpedjiev, Adam M. Phillippy, Evan E. Eichler

Bioinform., 2022

2020

Weighted minimizer sampling improves long read mapping.

Chirag Jain, Arang Rhie, Haowen Zhang, Claudia Chu, Brian Walenz, Sergey Koren, Adam M. Phillippy

Bioinform., 2020

2019

Integrating Hi-C links with assembly graphs for chromosome-scale assembly.

Jay Ghurye, Arang Rhie, Brian Walenz, Anthony D. Schmitt, Siddarth Selvaraj, Mihai Pop, Adam M. Phillippy, Sergey Koren

PLoS Comput. Biol., 2019

HLA*LA - HLA typing from linearly projected graph alignments.

Alexander T. Dilthey, Alexander J. Mentzer, Raphael Carapito, Clare Cutland, Nezih Cereb, Shabir A Madhi, Arang Rhie, Sergey Koren, Seiamak Bahram, Gil McVean, Adam M. Phillippy

Bioinform., 2019

2018

MUMmer4: A fast and versatile genome alignment system.

Guillaume Marçais, Arthur L. Delcher, Adam M. Phillippy, Rachel Coston, Steven L. Salzberg, Aleksey V. Zimin

PLoS Comput. Biol., 2018

A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases.

Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy

J. Comput. Biol., 2018

A fast adaptive algorithm for computing whole-genome homology maps.

Chirag Jain, Sergey Koren, Alexander T. Dilthey, Adam M. Phillippy, Srinivas Aluru

Bioinform., 2018

2014

Automated ensemble assembly and validation of microbial genomes.

Sergey Koren, Todd J. Treangen, Christopher Michael Hill, Mihai Pop, Adam M. Phillippy

BMC Bioinform., 2014

2013

Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies.

Michael C. Schatz, Adam M. Phillippy, Daniel D. Sommer, Arthur L. Delcher, Daniela Puiu, Giuseppe Narzisi, Steven L. Salzberg, Mihai Pop

Briefings Bioinform., 2013

2011

Interactive metagenomic visualization in a Web browser.

Brian D. Ondov, Nicholas H. Bergman, Adam M. Phillippy

BMC Bioinform., 2011

2009

Insignia: a DNA signature search web server for diagnostic assay development.

Adam M. Phillippy, Kunmi Ayanbule, Nathan J. Edwards, Steven L. Salzberg

Nucleic Acids Res., 2009

Efficient oligonucleotide probe selection for pan-genomic tiling arrays.

Adam M. Phillippy, Xiangyu Deng, Wei Zhang, Steven L. Salzberg

BMC Bioinform., 2009

2007

Comprehensive DNA Signature Discovery and Validation.

Adam M. Phillippy, Jacquline A. Mason, Kunmi Ayanbule, Daniel D. Sommer, Elisa Taviani, Anwar Huq, Rita R. Colwell, Ivor T. Knight, Steven L. Salzberg

PLoS Comput. Biol., 2007

Knowledge discovery using the sand spatial browser.

Hanan Samet, Adam M. Phillippy, Jagan Sankaranarayanan

Proceedings of the 8th Annual International Conference on Digital Government Research, 2007

2004

Comparative genome assembly.

Mihai Pop, Adam M. Phillippy, Arthur L. Delcher, Steven Salzberg

Briefings Bioinform., 2004